ggKbase home page

PLM3_30_b1_sep16_scaffold_6140

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_6140_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2..787)
DNA (786bp) protein (262aa)
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:AHG89924.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
penicillin-binding protein, beta-lactamase class C bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
PLM3_30_b1_sep16_scaffold_6140_2
unknown

Not on your lists

comp(891..2258)
DNA (1368bp) protein (456aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6140_3
unknown

Not on your lists

comp(2975..3103)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6140_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3288..4514)
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJZ7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02935.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6140_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4527..5222)
DNA (696bp) protein (232aa)
ABC transporter related Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNG3_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU62373.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_6140_6
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5283..6389)
DNA (1107bp) protein (369aa)
Efflux transporter, RND family, MFP subunit Tax=Niabella soli DSM 19437 RepID=H1NS78_9SPHI
Secretion protein HylD {ECO:0000313|EMBL:KFF10679.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
secretion protein HylD
PLM3_30_b1_sep16_scaffold_6140_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6511..7452)
DNA (942bp) protein (314aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGZ8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00609.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6140_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7596..8099)
DNA (504bp) protein (168aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQ06_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00001.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6140_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8202..8510)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T815_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV96953.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6140_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8859..11042)
DNA (2184bp) protein (728aa)
Histidine kinase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PH97_CHIPD
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACU58076.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_6140_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11463..12119)
DNA (657bp) protein (219aa)
Two component transcriptional regulator, LytTR family Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDX2_CHIPD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACU61472.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
PLM3_30_b1_sep16_scaffold_6140_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12258..14687)
DNA (2430bp) protein (810aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TAL4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEV98176.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_6140_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

15269..16210
DNA (942bp) protein (314aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI00036A218A
WD40-like beta Propeller containing protein
WD40-like beta Propeller containing protein {ECO:0000313|EMBL:AHG91577.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_30_b1_sep16_scaffold_6140_14
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16358..16897)
DNA (540bp) protein (180aa)
acetyltransferase (EC:2.3.1.-)
Acetyltransferase {ECO:0000313|EMBL:ABG59707.1}; EC=2.3.1.- {ECO:0000313|EMBL:ABG59707.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
acetyltransferase Tax=Cytophaga aurantiaca RepID=UPI00035DBDA7
PLM3_30_b1_sep16_scaffold_6140_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17008..17520
DNA (513bp) protein (171aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI000380DCCA
DinB family protein
DinB family protein {ECO:0000313|EMBL:ACT93183.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM3_30_b1_sep16_scaffold_6140_16
unknown

Not on your lists

comp(17485..17649)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6140_17
unknown

Not on your lists

comp(17603..18253)
DNA (651bp) protein (217aa)

This feature has no annotations

Displaying 17 items

View Taxonomy