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PLM3_30_b1_sep16_scaffold_6182

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_6182_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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193..783
DNA (591bp) protein (197aa)
RNA polymerase sigma factor Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ6_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6182_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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780..1376
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00804.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6182_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1351..2379
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJQ8_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00805.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6182_4
unknown

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comp(2433..2564)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6182_5
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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2606..3025
DNA (420bp) protein (140aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Ignavibacteria_35_7_curated
PLM3_30_b1_sep16_scaffold_6182_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3077..3943)
DNA (867bp) protein (289aa)
Orotidine 5'-phosphate decarboxylase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKX6_NIAKG
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KIC93267.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
orotidine 5'-phosphate decarboxylase
PLM3_30_b1_sep16_scaffold_6182_7
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(3956..5311)
DNA (1356bp) protein (452aa)
Kynurenine 3-monooxygenase {ECO:0000256|HAMAP-Rule:MF_01971}; EC=1.14.13.9 {ECO:0000256|HAMAP-Rule:MF_01971};; Kynurenine 3-hydroxylase {ECO:0000256|HAMAP-Rule:MF_01971}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
kynurenine 3-monooxygenase (EC:1.14.13.9)
Kynurenine 3-monooxygenase Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TS97_MARTH
PLM3_30_b1_sep16_scaffold_6182_8
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5319..5996)
DNA (678bp) protein (226aa)
Kynureninase {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800}; EC=3.7.1.3 {ECO:0000256|HAMAP-Rule:MF_01970, ECO:0000256|PIRNR:PIRNR038800};; L-kynurenine hydrolase {ECO:0000256|HAMAP-Rule:MF_01970}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Kynureninase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKX7_NIAKG
Kynureninase
PLM3_30_b1_sep16_scaffold_6182_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(6023..6550)
DNA (528bp) protein (176aa)
kynureninase Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EC34
kynureninase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_6182_10

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comp(6600..7013)
DNA (414bp) protein (138aa)
2-aminomuconate deaminase (AmnD) {ECO:0000313|EMBL:AIF17173.1}; EC=3.5.99.5 {ECO:0000313|EMBL:AIF17173.1};; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_76_C12.;"
Endoribonuclease L-PSP Tax=Fulvivirga imtechensis AK7 RepID=L8JKX0_9BACT
2-aminomuconate deaminase
PLM3_30_b1_sep16_scaffold_6182_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(7038..8489)
DNA (1452bp) protein (484aa)
Aldehyde dehydrogenase (NAD) family protein Tax=Microscilla marina ATCC 23134 RepID=A1ZJ19_9BACT
NAD-dependent aldehyde dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
PLM3_30_b1_sep16_scaffold_6182_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8504..9289)
DNA (786bp) protein (262aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEW00817.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEW00817.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKX8_NIAKG
3-oxoacyl-(acyl-carrier-protein) reductase
PLM3_30_b1_sep16_scaffold_6182_13
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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9375..9905
DNA (531bp) protein (177aa)
3-hydroxyanthranilate 3,4-dioxygenase; K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6] bin=BACIGN_2 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
3-hydroxyanthranilate 3,4-dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; EC=1.13.11.6 {ECO:0000256|HAMAP-Rule:MF_00825};; 3-hydroxyanthranilate oxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; 3-hydroxyanthranilic acid dioxygenase {ECO:0000256|HAMAP-Rule:MF_00825}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
3-hydroxyanthranilate 3,4-dioxygenase
PLM3_30_b1_sep16_scaffold_6182_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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9988..10953
DNA (966bp) protein (322aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase (EC:4.1.1.45)
2-amino-3-carboxylmuconate-6-semialdehyde decarboxylase Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1DDU4_MYXXD
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
PLM3_30_b1_sep16_scaffold_6182_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11012..11836)
DNA (825bp) protein (275aa)
Glycerophosphoryl diester phosphodiesterase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKX9_NIAKG
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AEW00818.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6182_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11957..12466)
DNA (510bp) protein (170aa)
Transcriptional regulator bin=GWF2_Bacteroidetes_49_14 species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
PLM3_30_b1_sep16_scaffold_6182_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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12707..13645
DNA (939bp) protein (313aa)
Putative uncharacterized protein Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W0C6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT91860.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
PLM3_30_b1_sep16_scaffold_6182_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(13877..14971)
DNA (1095bp) protein (365aa)
mrp Tax=Segetibacter koreensis RepID=UPI00036AEAC9
ATP-binding protein {ECO:0000313|EMBL:KIC93273.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ParA/MinD-like ATPase
PLM3_30_b1_sep16_scaffold_6182_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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15075..15713
DNA (639bp) protein (213aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKY1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00820.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6182_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15787..16047)
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC95432.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein bin=GWA2_Ignavibacteria_55_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Displaying 20 items

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