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PLM3_30_b1_sep16_scaffold_6514

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_6514_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..1771
DNA (1770bp) protein (590aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374E8F3
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAO45713.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
TonB-dependent receptor
PLM3_30_b1_sep16_scaffold_6514_2
unknown

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2337..2552
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6514_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2821..3135)
DNA (315bp) protein (105aa)
Rhodanese domain protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEF3_CHIPD
NADH oxidase {ECO:0000313|EMBL:KIC93313.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
rhodanese domain-containing protein
PLM3_30_b1_sep16_scaffold_6514_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3146..3970)
DNA (825bp) protein (275aa)
PASTA domain containing protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB2_NIAKG
PASTA domain-containing protein
PASTA domain containing protein {ECO:0000313|EMBL:AEV96718.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6514_5

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comp(4085..4945)
DNA (861bp) protein (287aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ddl; D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPB0_NIAKG
PLM3_30_b1_sep16_scaffold_6514_6
unknown

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comp(5096..5263)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_6514_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5290..5637)
DNA (348bp) protein (116aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEF6_CHIPD
Ferredoxin {ECO:0000313|EMBL:KIC93316.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
4Fe-4S ferredoxin
PLM3_30_b1_sep16_scaffold_6514_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5764..6756
DNA (993bp) protein (331aa)
Acyl-CoA reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPA7_NIAKG
acyl-CoA reductase
Acyl-CoA reductase {ECO:0000313|EMBL:AEV96713.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_6514_9
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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6955..8319
DNA (1365bp) protein (455aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000364A3BC
peptidase A2
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_6514_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8385..9530)
DNA (1146bp) protein (382aa)
Glycosidase Tax=Chryseobacterium sp. CF314 RepID=J3CKS2_9FLAO
1,4-alpha-glucan branching protein {ECO:0000313|EMBL:KIC93333.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha amylase
PLM3_30_b1_sep16_scaffold_6514_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9936..11171
DNA (1236bp) protein (412aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000313|EMBL:AEV96710.1}; EC=1.17.1.2 {ECO:0000313|EMBL:AEV96710.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000374C7D7
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
PLM3_30_b1_sep16_scaffold_6514_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11301..12191)
DNA (891bp) protein (297aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Malonyl CoA-acyl carrier protein transacylase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRB6_CHIPD
malonyl CoA-acyl carrier protein transacylase
PLM3_30_b1_sep16_scaffold_6514_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12420..13016)
DNA (597bp) protein (199aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
GTP cyclohydrolase 1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9X6_NIAKG
GTP cyclohydrolase 1
PLM3_30_b1_sep16_scaffold_6514_14
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(13197..13610)
DNA (414bp) protein (138aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YX82_AEQSU
6-pyruvoyl-tetrahydropterin synthase
6-pyruvoyl-tetrahydropterin synthase {ECO:0000313|EMBL:AFL81600.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
PLM3_30_b1_sep16_scaffold_6514_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13752..13994
DNA (243bp) protein (81aa)
Futalosine hydrolase {ECO:0000256|HAMAP-Rule:MF_00991}; Short=FL hydrolase {ECO:0000256|HAMAP-Rule:MF_00991};; EC=3.2.2.26 {ECO:0000256|HAMAP-Rule:MF_00991};; Futalosine nucleosidase {ECO:0000256|HAMAP-Rule:MF_00991}; Menaquinone biosynthetic enzyme MqnB {ECO:0000256|HAMAP-Rule:MF_00991}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
Futalosine nucleosidase Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KL64_SOLCM
futalosine nucleosidase
Displaying 15 items

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