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PLM3_30_b1_sep16_scaffold_271

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_271_1
unknown

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1..69
DNA (69bp) protein (23aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_271_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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651..1118
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB86_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02469.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_271_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1163..1615
DNA (453bp) protein (151aa)
Regulatory protein MarR Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB85_NIAKG
Transcriptional regulator {ECO:0000313|EMBL:KIC94810.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
regulatory protein MarR
PLM3_30_b1_sep16_scaffold_271_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1624..3132
DNA (1509bp) protein (503aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB84_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02467.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_271_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3485..4399
DNA (915bp) protein (305aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037CE48A
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_271_6
unknown

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comp(4430..4714)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_271_7
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5085..5831)
DNA (747bp) protein (249aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB78_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO42802.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_271_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5986..7026)
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB77_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02460.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_271_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7295..8719)
DNA (1425bp) protein (475aa)
MATE efflux family protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XVJ3_PEDHD
Multidrug transporter MatE {ECO:0000313|EMBL:KIC92057.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
MATE efflux family protein
PLM3_30_b1_sep16_scaffold_271_10
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8865..9545)
DNA (681bp) protein (227aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR05_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94814.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_271_11
unknown

Not on your lists

9625..11097
DNA (1473bp) protein (491aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_271_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11553..14195
DNA (2643bp) protein (881aa)
Metallophosphoesterase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRL5_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO42884.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
metallophosphoesterase
PLM3_30_b1_sep16_scaffold_271_13
unknown

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14198..14710
DNA (513bp) protein (171aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_271_14
unknown

Not on your lists

14809..15108
DNA (300bp) protein (100aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_271_15
unknown

Not on your lists

15597..15854
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_271_16
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16181..16981
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W078_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK36039.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_271_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17021..18022)
DNA (1002bp) protein (334aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase IV Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL26_NIAKG
DNA polymerase IV
PLM3_30_b1_sep16_scaffold_271_18
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18470..21484)
DNA (3015bp) protein (1005aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00002518}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00002518};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DNA polymerase III, alpha subunit Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL27_NIAKG
DNA polymerase III subunit alpha
PLM3_30_b1_sep16_scaffold_271_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22081..22332
DNA (252bp) protein (84aa)
RNP-1 like RNA-binding protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T884_NIAKG
RNA-binding protein {ECO:0000313|EMBL:KIC90491.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RNP-1 like RNA-binding protein
PLM3_30_b1_sep16_scaffold_271_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22481..22783
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:KIC94866.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PLM3_30_b1_sep16_scaffold_271_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22795..23085)
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFR7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99506.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_271_22
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23374..26325
DNA (2952bp) protein (984aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000365B277
Uncharacterized protein {ECO:0000313|EMBL:KIC90521.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
integral membrane sensor signal transduction histidine kinase
PLM3_30_b1_sep16_scaffold_271_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26372..26998
DNA (627bp) protein (209aa)
Two component transcriptional regulator, LuxR family Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJC6_FLUTR
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC90522.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
LuxR family transcriptional regulator
PLM3_30_b1_sep16_scaffold_271_24
unknown

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27541..27684
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 24 items

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