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PLM3_30_b1_sep16_scaffold_627

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b1_sep16_scaffold_627_1
unknown

Not on your lists

242..694
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_627_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

768..3284
DNA (2517bp) protein (839aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037464A5
TonB-dependent receptor
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
PLM3_30_b1_sep16_scaffold_627_3
unknown

Not on your lists

3471..4310
DNA (840bp) protein (280aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_627_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4313..5230)
DNA (918bp) protein (306aa)
Putative transmembrane protein Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4M3_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIC95839.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
transmembrane protein
PLM3_30_b1_sep16_scaffold_627_5
unknown

Not on your lists

comp(5227..5403)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_627_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5574..6896
DNA (1323bp) protein (441aa)
OmpA/MotB domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQY6_NIAKG
OmpA family protein {ECO:0000313|EMBL:GAO43280.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
OmpA/MotB domain-containing protein
PLM3_30_b1_sep16_scaffold_627_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7096..7785
DNA (690bp) protein (230aa)
NAD-dependent epimerase/dehydratase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNW5_NIAKG
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEW02050.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7804..8403
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:AEW02290.1}; EC=3.2.2.21 {ECO:0000313|EMBL:AEW02290.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA-3-methyladenine glycosylase II Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7N5_NIAKG
DNA-3-methyladenine glycosylase II
PLM3_30_b1_sep16_scaffold_627_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8822..9259)
DNA (438bp) protein (146aa)
amino acid aminotransferase Tax=Cytophagales str. B6 RepID=UPI0003B415C8
Uncharacterized protein {ECO:0000313|EMBL:KIC92125.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_627_10
unknown

Not on your lists

comp(9286..9441)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_30_b1_sep16_scaffold_627_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


9800..10225
DNA (426bp) protein (142aa)
recombinase RecA Tax=Segetibacter koreensis RepID=UPI0003759F0A
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
recombinase RecA
PLM3_30_b1_sep16_scaffold_627_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10243..10638
DNA (396bp) protein (132aa)
Protein RecA Tax=Niabella soli DSM 19437 RepID=H1NUK8_9SPHI
Suspect SCG annotation. See neighboring gene [PLM3_30_b1_sep16_scaffold_627_11].
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
recombinase RecA
PLM3_30_b1_sep16_scaffold_627_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10864..11499)
DNA (636bp) protein (212aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02511.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11649..12101
DNA (453bp) protein (151aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Methylglyoxal synthase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH2_NIAKG
Methylglyoxal synthase
PLM3_30_b1_sep16_scaffold_627_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12138..14177
DNA (2040bp) protein (680aa)
UvrABC system protein B Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH3_NIAKG
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Excinuclease ABC subunit B
PLM3_30_b1_sep16_scaffold_627_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14395..16878
DNA (2484bp) protein (828aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D9A8B
AsmA family protein
AsmA family protein {ECO:0000313|EMBL:AEV96666.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17059..19893
DNA (2835bp) protein (945aa)
DNA polymerase I {ECO:0000313|EMBL:AEW02514.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AEW02514.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase I Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCH4_NIAKG
DNA polymerase I
PLM3_30_b1_sep16_scaffold_627_18
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19963..20613
DNA (651bp) protein (217aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003763C39
Uncharacterized protein {ECO:0000313|EMBL:GAO42227.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
thioredoxin
PLM3_30_b1_sep16_scaffold_627_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20926..21681)
DNA (756bp) protein (252aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEW02306.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEW02306.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U9_NIAKG
3-oxoacyl-(acyl-carrier-protein) reductase
PLM3_30_b1_sep16_scaffold_627_20
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(22086..22925)
DNA (840bp) protein (280aa)
Membrane protein Tax=Algoriphagus machipongonensis RepID=A3HYM3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIF30169.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
hypothetical protein
PLM3_30_b1_sep16_scaffold_627_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22938..24446)
DNA (1509bp) protein (503aa)
GH3 auxin-responsive promoter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V0_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEW02307.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24495..25304)
DNA (810bp) protein (270aa)
Sulfate-transporting ATPase {ECO:0000313|EMBL:AEW02308.1}; EC=3.6.3.25 {ECO:0000313|EMBL:AEW02308.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Sulfate-transporting ATPase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V1_NIAKG
sulfate-transporting ATPase
PLM3_30_b1_sep16_scaffold_627_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25423..26376
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Methylenetetrahydrofolate reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V2_NIAKG
5,10-methylenetetrahydrofolate reductase (NAD(P))
PLM3_30_b1_sep16_scaffold_627_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26544..27227)
DNA (684bp) protein (228aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02310.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27311..29257)
DNA (1947bp) protein (649aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V4_NIAKG
PpiC-type peptidyl-prolyl cis-trans isomerase
PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:AEW02311.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29259..30698)
DNA (1440bp) protein (480aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8V5_NIAKG
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AEW02312.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM3_30_b1_sep16_scaffold_627_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30875..32356
DNA (1482bp) protein (494aa)
RNA methyltransferase Tax=Niabella aurantiaca RepID=UPI0003745FDC
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:AHF16095.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PLM3_30_b1_sep16_scaffold_627_28
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32551..34269)
DNA (1719bp) protein (573aa)
peptidase S8/S53 subtilisin kexin sedolisin Tax=Schlesneria paludicola RepID=UPI00029B50C8
Uncharacterized protein {ECO:0000313|EMBL:ETY82532.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM3_30_b1_sep16_scaffold_627_29
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34387..35157)
DNA (771bp) protein (257aa)
Enoyl-CoA hydratase/isomerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U6_NIAKG
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIC96337.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Enoyl-CoA hydratase/isomerase
PLM3_30_b1_sep16_scaffold_627_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35277..35756)
DNA (480bp) protein (160aa)
Phenylacetic acid degradation protein paaN {ECO:0000313|EMBL:AEW02302.1}; EC=1.2.1.3 {ECO:0000313|EMBL:AEW02302.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Phenylacetic acid degradation protein paaN Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8U5_NIAKG
phenylacetic acid degradation protein paaN
Displaying items 1-30 of 41 in total

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