ggKbase home page

PLM3_30_b2_sep16_scaffold_5473

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_5473_1
unknown

Not on your lists

2..145
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_5473_2
Brevibacillus laterosporus, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(137..544)
DNA (408bp) protein (136aa)
Putative uncharacterized protein Tax=Brevibacillus laterosporus LMG 15441 RepID=F7TVZ6_BRELA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG26834.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus laterosporus LMG 15441.;"
PLM3_30_b2_sep16_scaffold_5473_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(590..913)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XD01_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62347.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_5473_4

Not on your lists

comp(906..1475)
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KN25_9GAMM
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49488.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of hypothetical function duf1801
PLM3_30_b2_sep16_scaffold_5473_trna_1
unknown

Not on your lists

comp(1633..1704)
DNA (72bp)
transferRNA Val
PLM3_30_b2_sep16_scaffold_5473_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

1843..2493
DNA (651bp) protein (217aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D3C8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY19239.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative phospholipid N-methyltransferase
PLM3_30_b2_sep16_scaffold_5473_6
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2490..3902
DNA (1413bp) protein (471aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
fumarase (EC:4.2.1.2)
fumarate hydratase Tax=Verrucomicrobium spinosum RepID=UPI00017458E4
PLM3_30_b2_sep16_scaffold_5473_7
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3930..4304
DNA (375bp) protein (125aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003771C86
Uncharacterized protein {ECO:0000313|EMBL:EIM75761.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_5473_8
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4285..5475)
DNA (1191bp) protein (397aa)
GCN5-related N-acetyltransferase family protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YXL9_METPS
GCN5-related N-acetyltransferase family protein
GCN5-related N-acetyltransferase family protein {ECO:0000313|EMBL:BAI61191.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM3_30_b2_sep16_scaffold_5473_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(7015..7332)
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D7N6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17526.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_5473_10
unknown

Not on your lists

comp(7397..7615)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_5473_11
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

7829..9100
DNA (1272bp) protein (424aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002DB9158
bifunctional protein LOR/SDH
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3_30_b2_sep16_scaffold_5473_12
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

9113..9724
DNA (612bp) protein (204aa)
amidinotransferase Tax=Gemmata obscuriglobus RepID=UPI00016C54A5
amidinotransferase
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
Displaying 13 items

View Taxonomy