ggKbase home page

PLM3_30_b2_sep16_scaffold_6918

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_6918_1
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(90..1214)
DNA (1125bp) protein (375aa)
Glycosyl transferase, group 1 family protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM08_9BACT
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDY80731.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
group 1 glycosyl transferase
PLM3_30_b2_sep16_scaffold_6918_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(1214..1981)
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU07_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB75889.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_6918_3
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1997..3163)
DNA (1167bp) protein (389aa)
Transporter, SSS family, putative Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JM06_9BACT
Transporter, SSS family, putative {ECO:0000313|EMBL:EDY81020.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
Na+/solute symporter
PLM3_30_b2_sep16_scaffold_6918_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(3184..3666)
DNA (483bp) protein (161aa)
Na+/solute symporter Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZU08_OPITP
Na+/solute symporter
Na+/solute symporter {ECO:0000313|EMBL:ACB75890.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM3_30_b2_sep16_scaffold_6918_5
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3779..6328)
DNA (2550bp) protein (850aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI0003617D5A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ96557.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM3_30_b2_sep16_scaffold_6918_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6362..7417)
DNA (1056bp) protein (352aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XN9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85576.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_30_b2_sep16_scaffold_6918_7
unknown

Not on your lists

7511..7600
DNA (90bp) protein (30aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_6918_8
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7606..8085
DNA (480bp) protein (160aa)
hypothetical protein Tax=Methylocystis rosea RepID=UPI00035D39DF
peptidoglycan-binding domain-containing protein
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:AGA69465.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
PLM3_30_b2_sep16_scaffold_6918_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(8013..8510)
DNA (498bp) protein (166aa)
Single-stranded nucleic acid binding R3H domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CXX7_9BACT
Single-stranded nucleic acid binding R3H domain protein {ECO:0000313|EMBL:EDY21125.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
single-stranded nucleic acid binding R3H domain-containing protein
PLM3_30_b2_sep16_scaffold_6918_10
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8507..9619)
DNA (1113bp) protein (371aa)
Membrane protein insertase YidC Tax=Chthoniobacter flavus Ellin428 RepID=B4CXX8_9BACT
yidC; preprotein translocase subunit YidC
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
Displaying 10 items

View Taxonomy