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PLM3_30_b2_sep16_scaffold_11177

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_11177_1

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142..555
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMG5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AIA16941.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_11177_2
unknown

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728..1030
DNA (303bp) protein (101aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_11177_3
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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1092..2573
DNA (1482bp) protein (494aa)
Peptidase M28 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQF2_9CYAN
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AGY59834.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
PLM3_30_b2_sep16_scaffold_11177_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2678..3127)
DNA (450bp) protein (150aa)
hypothetical protein Tax=Rhodopseudomonas sp. B29 RepID=UPI000347936F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD07478.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_30_b2_sep16_scaffold_11177_5
unknown

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3398..4027
DNA (630bp) protein (210aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA300-N18 RepID=UPI0003796734
PLM3_30_b2_sep16_scaffold_11177_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4172..5248
DNA (1077bp) protein (359aa)
Homoserine O-acetyltransferase (EC:2.3.1.31)
Uncharacterized protein Tax=uncultured bacterium RepID=L7Y663_9BACT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_30_b2_sep16_scaffold_11177_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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5394..6083
DNA (690bp) protein (230aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT
RNA polymerase sigma-70 factor
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM3_30_b2_sep16_scaffold_11177_8

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6099..8399
DNA (2301bp) protein (767aa)
hypothetical protein Tax=Nevskia ramosa RepID=UPI0003B70BDB
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48716.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
serine/threonin protein kinase
PLM3_30_b2_sep16_scaffold_11177_9

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8551..8853
DNA (303bp) protein (101aa)
Tetratricopeptide repeat {ECO:0000313|EMBL:AIA10985.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_11177_10
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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9320..10354
DNA (1035bp) protein (345aa)
uroporphyrinogen III C-methyltransferase
Cell wall surface anchor family protein bin=GWC2_Nitrospirae-rel_56_14 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_30_b2_sep16_scaffold_11177_11
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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10478..12010
DNA (1533bp) protein (511aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036BE311
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_30_b2_sep16_scaffold_11177_12
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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12457..13728
DNA (1272bp) protein (424aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LGN0_SYNFM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_30_b2_sep16_scaffold_11177_13
unknown

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comp(13665..13931)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_11177_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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14708..16519
DNA (1812bp) protein (604aa)
D-aminoacylase Tax=uncultured Acidobacteria bacterium RepID=H5S9C8_9BACT
N-acyl-D-amino-acid deacylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_30_b2_sep16_scaffold_11177_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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16592..17002
DNA (411bp) protein (137aa)
Molecular chaperone (Small heat shock protein)-like protein Tax=Pedosphaera parvula Ellin514 RepID=B9XB80_9BACT
Molecular chaperone (Small heat shock protein)-like protein {ECO:0000313|EMBL:EEF62765.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
heat shock protein Hsp20
PLM3_30_b2_sep16_scaffold_11177_16
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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16999..18411
DNA (1413bp) protein (471aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Lon protease Tax=Pedosphaera parvula Ellin514 RepID=B9XB79_9BACT
ATP-dependent protease La
PLM3_30_b2_sep16_scaffold_11177_17
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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18408..19391
DNA (984bp) protein (328aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease Tax=Pedosphaera parvula Ellin514 RepID=B9XB79_9BACT
PLM3_30_b2_sep16_scaffold_11177_18

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comp(19519..19956)
DNA (438bp) protein (146aa)
Ca2+-binding protein, RTX toxin Tax=Oscillatoriales cyanobacterium JSC-12 RepID=K8GI12_9CYAN
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48822.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
galactose oxidase
Displaying 18 items

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