ggKbase home page

PLM3_30_b2_sep16_scaffold_4971

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_4971_1
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..715
DNA (714bp) protein (238aa)
Transcriptional regulator, ArsR family Tax=Ralstonia pickettii RepID=B2UH81_RALPJ
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHK57710.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
ArsR family transcriptional regulator
PLM3_30_b2_sep16_scaffold_4971_2
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(652..1071)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Opitutaceae bacterium TAV1 RepID=I6B3E0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF93152.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM3_30_b2_sep16_scaffold_4971_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

1645..2709
DNA (1065bp) protein (355aa)
Transcriptional regulator, GntR family Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZR3_RUBXD
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ABG03115.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_30_b2_sep16_scaffold_4971_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2832..4067
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036446C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16473.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM3_30_b2_sep16_scaffold_4971_trna_1
unknown

Not on your lists

4257..4329
DNA (73bp)
transferRNA Ala
PLM3_30_b2_sep16_scaffold_4971_5
unknown

Not on your lists

comp(4383..4607)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_4971_trna_2
unknown

Not on your lists

4533..4606
DNA (74bp)
transferRNA Ile
PLM3_30_b2_sep16_scaffold_4971_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(4623..6032)
DNA (1410bp) protein (470aa)
Membrane bound O-acyl transferase, MBOAT family protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02A32_SOLUE
MBOAT family membrane bound O-acyl transferase
Membrane bound O-acyl transferase, MBOAT family protein {ECO:0000313|EMBL:ABJ82094.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_30_b2_sep16_scaffold_4971_7
unknown

Not on your lists

comp(6052..7047)
DNA (996bp) protein (332aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_4971_8
unknown

Not on your lists

comp(7298..7552)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_4971_9
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7951..8433)
DNA (483bp) protein (161aa)
Hypothetical membrane protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LXZ1_SYNAS
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:ABC78951.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
PLM3_30_b2_sep16_scaffold_4971_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8594..9499
DNA (906bp) protein (302aa)
Mannose-6-phosphate isomerase type I Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR7_9BACT
Mannose-6-phosphate isomerase type I {ECO:0000313|EMBL:EDY20231.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Mannose-6-phosphate isomerase
PLM3_30_b2_sep16_scaffold_4971_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(9693..10001)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZR9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY20233.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_4971_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(10001..10699)
DNA (699bp) protein (233aa)
Alanine racemase domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CZS0_9BACT
Alanine racemase domain protein {ECO:0000313|EMBL:EDY20234.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
alanine racemase
PLM3_30_b2_sep16_scaffold_4971_13
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10732..11148
DNA (417bp) protein (139aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001744ED0
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_30_b2_sep16_scaffold_4971_14
unknown

Not on your lists

11289..11441
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_4971_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11498..12082)
DNA (585bp) protein (195aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001745087
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 17 items

View Taxonomy