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PLM3_30_b2_sep16_scaffold_3385

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_3385_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1..1179)
DNA (1179bp) protein (393aa)
cap:CLDAP_25010 acs; acetate--CoA ligase; K01895 acetyl-CoA synthetase [EC:6.2.1.1] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
acs; acetate--CoA ligase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_30_b2_sep16_scaffold_3385_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1342..2712
DNA (1371bp) protein (457aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:EDY17357.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EDY17357.1};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
2-methylcitrate dehydratase Tax=Chthoniobacter flavus Ellin428 RepID=B4D803_9BACT
PLM3_30_b2_sep16_scaffold_3385_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2797..3606
DNA (810bp) protein (270aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Methylisocitrate lyase Tax=Chthoniobacter flavus Ellin428 RepID=B4D804_9BACT
methylisocitrate lyase
PLM3_30_b2_sep16_scaffold_3385_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3667..4806
DNA (1140bp) protein (380aa)
citrate synthase (EC:2.3.3.1)
Citrate synthase Tax=Chthoniobacter flavus Ellin428 RepID=B4D805_9BACT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_3385_5
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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4880..5347
DNA (468bp) protein (156aa)
Thioesterase superfamily bin=GWB1_Deltaproteobacteria_rel_55_8 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
thioesterase superfamily protein
Tax=GWB1_Bdellovibrionales_55_8_curated
PLM3_30_b2_sep16_scaffold_3385_6

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5570..6064
DNA (495bp) protein (165aa)
Beta-lactamase {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140, ECO:0000256|SAAS:SAAS00063099};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
penA; beta-lactamase (EC:3.5.2.6)
BETA-LACTAMASE Tax=synthetic construct RepID=UPI0002B63CD3
PLM3_30_b2_sep16_scaffold_3385_7
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6150..6641
DNA (492bp) protein (164aa)
hypothetical protein Tax=Streptomyces somaliensis RepID=UPI00029A4B3A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH27690.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3_30_b2_sep16_scaffold_3385_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6721..7638
DNA (918bp) protein (306aa)
Methylated-DNA-protein-cysteine methyltransferase Tax=Pseudomonas aeruginosa RepID=U8HDA7_PSEAI
ada; putative methylated-DNA-protein-cysteine methyltransferase
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AKE68314.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
PLM3_30_b2_sep16_scaffold_3385_9

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7727..8380
DNA (654bp) protein (218aa)
Mll0909 protein Tax=uncultured bacterium RepID=D5MTC7_9BACT
Mll0909 protein {ECO:0000313|EMBL:BAJ07077.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
isoprenylcysteine carboxyl methyltransferase
PLM3_30_b2_sep16_scaffold_3385_10
unknown

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comp(8353..8541)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_3385_11
unknown

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8602..8829
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_3385_12
unknown

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9287..10864
DNA (1578bp) protein (526aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_3385_13
Aphanizomenon flos-aquae, Aphanizomenon, Nostocales, Cyanobacteria, Bacteria

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11128..11775
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CBX0_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KHG41090.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Aphanizomenon.;" source="Aphanizomenon flos-aquae 2012/KM1/D3.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_3385_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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11829..12455
DNA (627bp) protein (209aa)
SAM (And some other nucleotide) binding motif Tax=Planctomyces maris DSM 8797 RepID=A6CBW8_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_30_b2_sep16_scaffold_3385_15

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12467..12943
DNA (477bp) protein (159aa)
Putative transferase Tax=uncultured bacterium F41-01 RepID=I3VIR2_9BACT
Putative transferase {ECO:0000313|EMBL:AFK79268.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium F41-01.;"
hypothetical protein
Displaying 15 items

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