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PLM3_30_b2_sep16_scaffold_1808_3

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(1418..1744)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 97
  • Evalue 8.80e-18
DNA-directed RNA polymerase subunit omega Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 71.0
  • Bit_score: 97
  • Evalue 6.30e-18
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 62.0
  • Bit_score: 70
  • Evalue 3.10e-10

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 327
ATGCTTGCCCCGCAATTTACTCCATCGACCCTCGCGGCCGGGATGCCGGTCATTCTTCAATTCCCAACGGGAGCAACCAGCCCCGTTCGTTCCTTGCGCCATATGACGACTCAACTTCTGCAAGAAGCAGCTCAGGTAATCCCGAATCAGCAACTTCTGATTAACGTTGTTTCCAAACGCGTTCGTCAGCTTGGCTTAGGACATCGGCCCATGGTTGAAACGACGCCACGGATGTCGCTCACCGATATAGCACTCAAGGAAATCATCGCTGGCAAGTTGACCTACGAATCGCTTCAAGAGTCGTCGTCCGACGGTGCCGGCGCGTAG
PROTEIN sequence
Length: 109
MLAPQFTPSTLAAGMPVILQFPTGATSPVRSLRHMTTQLLQEAAQVIPNQQLLINVVSKRVRQLGLGHRPMVETTPRMSLTDIALKEIIAGKLTYESLQESSSDGAGA*