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PLM3_30_b2_sep16_scaffold_1808

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_1808_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..768)
DNA (768bp) protein (256aa)
Short-chain dehydrogenase/reductase SDR bin=GWB1_Deltaproteobacteria_rel_55_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EEF57439.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
short-chain dehydrogenase/reductase family oxidoreductase
PLM3_30_b2_sep16_scaffold_1808_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(887..1348)
DNA (462bp) protein (154aa)
SsrA-binding protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN7_9BACT
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
SsrA-binding protein
PLM3_30_b2_sep16_scaffold_1808_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1418..1744)
DNA (327bp) protein (109aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-directed RNA polymerase subunit omega Tax=Chthoniobacter flavus Ellin428 RepID=B4DCN8_9BACT
DNA-directed RNA polymerase subunit omega
PLM3_30_b2_sep16_scaffold_1808_trna_1
unknown

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1980..2053
DNA (74bp)
transferRNA Pro
PLM3_30_b2_sep16_scaffold_1808_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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2153..2701
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D489_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18690.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_1808_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(2974..4200)
DNA (1227bp) protein (409aa)
lldD; L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases (EC:1.1.2.3)
L-lactate dehydrogenase (FMN-dependent)-like alpha-hydroxy acid dehydrogenases Tax=Prochlorococcus marinus (strain MIT 9211) RepID=A9BCT8_PROM4
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_30_b2_sep16_scaffold_1808_6
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4284..5807)
DNA (1524bp) protein (508aa)
phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH Tax=Chthoniobacter flavus Ellin428 RepID=B4CZH3_9BACT
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_1808_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5897..6835)
DNA (939bp) protein (313aa)
Transcriptional regulator, AraC family Tax=Pedosphaera parvula Ellin514 RepID=B9XCC3_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF62591.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
araC; AraC family transcriptional regulator
PLM3_30_b2_sep16_scaffold_1808_8
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

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comp(6845..7270)
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Oscillatoria nigro-viridis PCC 7112 RepID=K9VRL3_9CYAN
hypothetical protein
Tax=GWC2_Nitrospirae_57_9_curated
Displaying 9 items

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