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PLM3_30_b2_sep16_scaffold_975_2

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(914..1837)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured verrucomicrobium HF0500_18J03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 300.0
  • Bit_score: 272
  • Evalue 5.70e-70
Shikimate dehydrogenase Tax=uncultured verrucomicrobium HF0500_18J03 RepID=E7C598_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 300.0
  • Bit_score: 272
  • Evalue 4.10e-70
shikimate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 307.0
  • Bit_score: 241
  • Evalue 2.20e-61

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Taxonomy

uncultured verrucomicrobium HF0500_18J03 → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 924
ATGCAGACAACCCAACGTTATACGCTCGGCGACTTTGAAAAGTGGAGTGAGGTAGCGCGCGACATTGATCCACCGATTCGCCTGGGCGTCTTTGGCGATCCAGTTGCGCACTCGCTTTCGCCCGAAATGCAAAATGCCGCCCTGCGAGCCTGCGAGATCGAAGCCCAATACACGCGTTTTCATATCCGCCCGAATGAATTGAGATCGGCTCTGCGCTTTTTGCGAAATCTGGACTTCGTAGGAGTGAACCTGACGGTGCCACACAAAACTGCGGGCTGCGGGCAGATCGACGAAGCGGATGAATCCGCAAGTCGCGTAGGAGCCGTAAACACAATTCGCGTTCGCGATAAGAAACTGGTCGGATCGAATACTGATGGTGAAGGATTCTTGCGCGCCATCCGCGGCGAGTTTTCTGTCGATCTGCGCGATCTTCGAGTGCTCATAATCGGCGCCGGAGGCGGAACGGGACGTGCAATTGCCTGGCAATGCGCGCTCGAGAATTGTGAGCGCCTCGTCCTCGTTAATCGCACTTTCGAAAAAGCAAATGCATTGGCCGAGCGATTGCGTTCGTTTTTTATGGAAGCTCGCGTGCTAGGCCCCGCCGCGCGCCTTGAAGCCGTAGCATGGGAAGAATCGGTAATGCGTATGCAACTTGCGGACATCGATCTCATCGTCAACGCCACTCCGCTTGGAATGAATCCAAGCAATGCGGCGCCAATCCCGGGCCGCTTGATCGCTCCGCATCACATGGTTTTCGATTGCGTGTACGGCCCTTCGAAAACCGCTCTGCTACGCGCGGCCGAACAGGCCGGCGCGCGCAGTGCCAATGGAATATCGATGCTGCTACACCAAGGTGCGCTTTCGTTTTCCATTTGGTTCGATCGCGAGCCACCAATCGACGCGATGCGCAAAACGCTACTGTAG
PROTEIN sequence
Length: 308
MQTTQRYTLGDFEKWSEVARDIDPPIRLGVFGDPVAHSLSPEMQNAALRACEIEAQYTRFHIRPNELRSALRFLRNLDFVGVNLTVPHKTAGCGQIDEADESASRVGAVNTIRVRDKKLVGSNTDGEGFLRAIRGEFSVDLRDLRVLIIGAGGGTGRAIAWQCALENCERLVLVNRTFEKANALAERLRSFFMEARVLGPAARLEAVAWEESVMRMQLADIDLIVNATPLGMNPSNAAPIPGRLIAPHHMVFDCVYGPSKTALLRAAEQAGARSANGISMLLHQGALSFSIWFDREPPIDAMRKTLL*