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PLM3_30_b2_sep16_scaffold_975_8

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 7458..8645

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:CDH43282.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.1
  • Coverage: 368.0
  • Bit_score: 370
  • Evalue 2.00e-99
Efflux pump, RND family, membrane fusion protein bin=GWB2_Desulfobacterales_56_26 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 51.6
  • Coverage: 368.0
  • Bit_score: 364
  • Evalue 7.70e-98
RND transporter similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 365.0
  • Bit_score: 359
  • Evalue 7.10e-97

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Taxonomy

Candidatus Contendobacter odensis → Candidatus Contendobacter → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGCATGACGTGGCGAAAGGTATTTCAACTGTTCCAGTTCAATCGGATGCAAGACCGCGACGTCGCGGGCGGGCGGTTGGTATTGCGATAGGTCTGCTGGCCGCCATTTTGGTTTTCGCTTTTGGCATTAAAGCGCTGCAAATCGGCAAGATGATGTCAACACCGATGGTGATGCCGCCGACGACAGTGTCGAGCGTAACGGTGAAAGAAGAAGATTGGGCGCCGACATTGTCGGCTGTTGGTTCGATCTCGGCGGTACAGGGCGCCGTCGTTTCCAGCGAGCTTGGCGGAGTCGTCAGCCAAATCGGATTTGAAAACGGCGGTACCGCGAAGAAAGGCGATCTGTTGCTCCAGCTCGACGCGTCGGCCGAAGAAGCGCTTTTGCGGTCGGCAGAAGCTGAAGCCGAGCTGGGACGGCAGGATTTGGAACGAACTCGCGGCCTCGCGTCGCAAAAGGTGGTTTCAAAGGCTGAACTCGACGCTGCGGAATCGAAATTCAACAGGCTCAACGCTGTTGCCGATCAAATGCGTTCTAATATTCGGAAGAAGACGATTATCGCGCCATTTGATGGCCAGCTCGGGATTCGTCAGGTGAACGTTGGGCAAATGATCAACTCGGGCCAACAAGTGGTGCAGCTCACTTCACTCGACTCACTCTTCGCCGATTTCGCCTTGCCCCAACAATATCTTGGTCAGTTAACTCCGGGCTTGCAGGTGCACGTGACCACGGACGCTCTTCCCGGCCATGTATTTCCCGGAAAGGTGACCGCAATTAATTCGATGGTGGATTCGAGCACGCGCAACATCACGCTGCAAGCGACCCTGGAGAATCCCGATCACGTGCTACGGCCCGGAATGTTCGCGAAAGCGGAAGTCACGTTGCCCGAAAAACACAAGGCGCTTGTCGTTCCGGGATCTGCAATTTCCTACGCACCGTTCGGCGACTCGGTTTTTGTGATTGAGAAAAAGAAAGACGAAAAGACCGGCAAAGAATCGCAAGCGATTCGACAGCAATTTGTGCGCGTCGGTGAAGCGCGCGGTGATCTCGTCGCGATTACGCAAGGATTGAAAGCCGGCGAAACCATCGTGAGTACGGGAGTTTTCAAACTGCGAAACGGAATGGCGGTGACGATCAACAACGATCTGGCGCCGAACCCGCAGGTAAATCCGAACCCAGTCGATTCGTAA
PROTEIN sequence
Length: 396
MHDVAKGISTVPVQSDARPRRRGRAVGIAIGLLAAILVFAFGIKALQIGKMMSTPMVMPPTTVSSVTVKEEDWAPTLSAVGSISAVQGAVVSSELGGVVSQIGFENGGTAKKGDLLLQLDASAEEALLRSAEAEAELGRQDLERTRGLASQKVVSKAELDAAESKFNRLNAVADQMRSNIRKKTIIAPFDGQLGIRQVNVGQMINSGQQVVQLTSLDSLFADFALPQQYLGQLTPGLQVHVTTDALPGHVFPGKVTAINSMVDSSTRNITLQATLENPDHVLRPGMFAKAEVTLPEKHKALVVPGSAISYAPFGDSVFVIEKKKDEKTGKESQAIRQQFVRVGEARGDLVAITQGLKAGETIVSTGVFKLRNGMAVTINNDLAPNPQVNPNPVDS*