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PLM3_30_b2_sep16_scaffold_592_13

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 15825..19943

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 1366.0
  • Bit_score: 2269
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' Tax=Chthoniobacter flavus Ellin428 RepID=B4D9K5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 1366.0
  • Bit_score: 2269
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 1369.0
  • Bit_score: 2010
  • Evalue 0.0

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4119
ATGAACGAACATTCCTGGCGTGAGTTAGTGGGCGAAGAACGCCCCGTGGGTTTTGATCAAGTCGCGATTGGCGTCGCGTCGAGTGACACGATGCGCTCGTGGAGCAAAGGAGAAGTCAAAAATCCCGAGACAATCAATTACCGGACCTTTAAACCGGAGAAAGGCGGCCTTTTCTGTGAACGCATTTTTGGTCCCACGCGCGATTGGGAGTGCTCATGCGGAAAATACAAGCGTATTAAACATAAGGGCGTCATCTGCGACCGCTGCGGCGTGGAAGTTACGCTGGCTCGCGTCCGTCGCGAACGCATGGGCCACATCGAATTAGCCGTACCGGTTTCGCACATCTGGTTTTACAAATGTATGCCCTCGCGCATCGGGCTCATGCTGGACATGAGCGCACGCCAGCTCGAGCGCGTCATTTATTATGAGGATTACATCGTCATCGATCCGGGCAAGACGCCGTTACAGAAGACACAGCTGCTGAACGAAGTCGAATACCGAGAGGCGCAGGAGCAGTACGGGGAGGATTTCGTTGCCGGCATGGGCGCGGATGCAATTAGAAAGCTTCTGGCCGAGATCGATCTCAACAAGCTCAACAAAGAGCTTGAGAAAGCGATGGGCGCGACCAAGAGCAAACAGATTCGCAAGAAACTGGCGAAGCGTCTCAAGCTGATCCAAGGCTTCCAAAATTCGCACGCGCGTCCCGAATGGATGATTCTGGATGTATTGCCGGTTATTCCACCGGATTTACGACCTCTGGTTCCGCTCGAAGGCGGACGTTTCGCCACCTCGGACCTGAACGATCTTTATCGTAGGGTTATTAATCGCAACAATCGGCTAAAAAACCTGCTCATGCTCAAGACGCCGGACGTCATCATTCGCAATGAAAAGCGAATGCTGCAGGAGGCGGTGGATGCACTGTTCGATAATGGCAGACATGGCCGTGCTGTAACTGGCGCTGGCAATCGGCCTCTAAAGTCACTGAGCGACATGCTCAAAGGGAAGGGTGGACGTTTCCGTCAAAATCTGCTTGGAAAACGCGTCGATTACTCAGGCCGCTCCGTAATTGTGATCGGTCCGGAGTTGAAGCTGCAGCAATGCGGATTGCCGAAGAAGATGGCGCTTGTGCTTTTCGAACCATTTATCATTCGCCGGCTTAAAGACCTTGGCTACGTGCACACCGTGCGCAGCGCGAAAAAGATGATCGAGCGTCAGACGCCGGAGGTTTGGGATATTCTCGATGAAGTGACCAAAGGTCATCCGGTGCTCCTCAATCGTGCGCCTACTCTGCACCGATTGTCCATCCAGGCTTTTGAACCTCAATTGATCGAGGGCGAAGCCATTCGAATTCATCCGCTGGTTTGCACTGCCTATAATGCGGACTTCGATGGCGACCAGATGGCGGTGCATGTGCCACTTTCAGTGGAAGCGCAGATGGAAGCACGCATGCTGATGCTCGCGCCGAATAACATTTTTTCGCCGTCCAGCGGAAAACCGATTACCACGCCTTCTCAAGACATCACGCTGGGCTGTTACTATCTTACCCAAACCCCGCGCGGTGCGGGCAAGGACGGGGGGCGCCTCTCATTGTTCGCCGATGCGACGGAAGTGGAATTTGCGATGGCAGAAGGAAGCATTCACACACATGATCGGATCCGGCTTAAGAACCCCGATTTCGGTAAGCAAACAATCTACGGAAACGCAGAAGCCAGAACGACCGAAACCACTGCAGGCCGTGTTATTTTTAACGAGATTTGGCCCAAACAGCTTGGATTTTTCAACAGACCCGCGGGCAAGAAGCAACTTAGCGACATTATCTGGCGCTGTTATCAAATCGCGGGACCGGCAGAGACCGTTGCGACGCTGGACAAACTAAAAGAGCTCGGCTTTGCCGAAGCCACCAAAGCCGGTATCTCAATTGGAATTTCGGACATGATCATTCCGAAAGAGAAGGAGACGGAGTTGGAGAATGCTTATAAGCAGATTCGACAGGTTGAGCAGCAATATCGCAAGGGCATTATCACGGACGGCGAACGCTACAACAAGATCATCGACATCTGGACACACGCCGGTGACGAAATTTCCAGTGCGATGTTTCGCACTCTGGAACACAACGACGGCCGCAAGGAGTTGAATCCGGTTTTCTTGATGGTGGATTCCGGTTCACGCGGTAACCGCCAGCAGGTTCGTCAGCTAGCAGGTATGCGCGGTTTGATGGCCAAACCTTCTGGCGAAATCATTGAGCGGCCGATCACGTCGAACTTCCGCGAAGGACTGACCGTGCTCGAGTACTTTATTTCTACTCACGGGGCTCGAAAAGGTCTTGCAGATACCGCGTTAAAGACTGCCGACTCCGGATATCTCACGCGCAAGCTCGTCGATGCTGCACAGGACGTGATCATCAACGAAAAGGACTGCGGTACTGTTAACGGCATTGTGGTGCGCTCGATTTACGAGGGTGACGAGGAGGTAGTGGATCTCGGACAGCGCATTATCGGGCGCGTAAGCTGCGAAACGATCGCTGACCCCGTAGACAAGAAGAAAAAGATCGTTAAAGCCAATCAGCTGATTGATGAAAAGATCGCAGCAGAGCTTCAGCGTGTCGGCGTGGAGAGCCTGAAGATTCGTTCGGTTCTTACGTGCGAGTGCGGCCGCGGTGTGTGCGCGATGTGTTATGGGCGGAACTTGGCTACAGGCCAGTACGTCAAGCTTGGCGAAGCGGTAGGGATTATTGCGGCCCAATCAATTGGCGAGCCGGGAACGCAATTGACGATGCGCACATTTCACATCGGTGGCACTGCCAGCCAGACTTTCAAGCAACCGATTATCAAGGCGAAGAACGACGGCACGGTGCGCTTCAATGATCTGCGCACTGTCCAAGCCCTCGACGGCAGTTGGATCGCGTTGAACAAGAATGGCTCGATTAGTGTGCACAACGCTGAAGGCCGCGAACTTGAGCGCTACAACGTGGTGATCGGGTCAATGATCTCCAAGGGCGACGGGACCGACGTTAAGAAGGGTGAAACCTTCGTTCAATGGGACCCCTACAACGTCCCGATTCTTACCGACAAAGGTGGCAAGATTGAGTTCCGCGACATGATAGCAGGTGTCACGATCAAGCGCGACGTCGATGAGGCGACAGGCCTGATGGGCACCGTTATCATTGAGCACAAGGAAGATTTGCACCCACAAATTGTTATCGTGGATGACAAGAAAGAAGTGCTCGCGAGTTACTCCATCCCGGCCGGCGCTCACGTCATCGTTGAAGAAGGTCAAAAGATACGAGCTGGCGCATTGCTGGCAAAGACACCGCGGAAAGTGGCGAAGACTAAAGACATCACCGGAGGCTTGCCGCGCGTAGCCGAATTATTTGAAGCGCGCCGGCCGAAGGACGCGGCTGAGATTGCCAAGATCGATGGCGTGGTTGAGATGGGCGGTACTGTCCGCGGAAAGCGACGCCTGATTTTAAAGGATCCCGACACCGGAGCCGAGGAAGAACATCTGATCCCGCTTACCAAACATATTATCGTGTTTAAGGGCGACTTCGTGAAAAAAGGTCAGCAACTTACCGAAGGCCCTGTAGTGCCTCACGAGATCCTCGAGGTCTGCGGACCGCAGGATTTGCAGGAGCACCTGGTCAACGAAGTCCAGGAAGTATACCGGCTACAAGGTGTGGAGATCAACGACAAGCACATCGAAATCATCGTGCGTCAGATGTTGCGCAAGGTGAAGATTACCGATCCCGGCGATACGTCGTTGCTCTGGGGCGATCAGGTCGACAAACTCGACTTCGAAGAGGAAAACAAGAAGGTCGTCGAGAAAGGTGGCAAGCCGGCAGAAGCCGTTCCCGTCTTACTTGGCATCACGAAAGCTTCACTCGAAACGGACAGCTTTATTTCCGCTGCCTCGTTCCAGGATACGACTCGCGTTCTTACGGAGGCGGCCACACTGGGCAAGGTCGATAAACTGCGCGGCTTCAAGGAAAACGTGATCATGGGTCACTTGATTCCCGCGGGCACCGGTTTCCCTGAGCACCGCGAGATCAAGCTGGTCGAAAAAGGTGAGCCGATTGGCGCAGCAGTAATGGAAGAAGCTGAGCCGCAGCCGGCTATCGGGTAG
PROTEIN sequence
Length: 1373
MNEHSWRELVGEERPVGFDQVAIGVASSDTMRSWSKGEVKNPETINYRTFKPEKGGLFCERIFGPTRDWECSCGKYKRIKHKGVICDRCGVEVTLARVRRERMGHIELAVPVSHIWFYKCMPSRIGLMLDMSARQLERVIYYEDYIVIDPGKTPLQKTQLLNEVEYREAQEQYGEDFVAGMGADAIRKLLAEIDLNKLNKELEKAMGATKSKQIRKKLAKRLKLIQGFQNSHARPEWMILDVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLLMLKTPDVIIRNEKRMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIVIGPELKLQQCGLPKKMALVLFEPFIIRRLKDLGYVHTVRSAKKMIERQTPEVWDILDEVTKGHPVLLNRAPTLHRLSIQAFEPQLIEGEAIRIHPLVCTAYNADFDGDQMAVHVPLSVEAQMEARMLMLAPNNIFSPSSGKPITTPSQDITLGCYYLTQTPRGAGKDGGRLSLFADATEVEFAMAEGSIHTHDRIRLKNPDFGKQTIYGNAEARTTETTAGRVIFNEIWPKQLGFFNRPAGKKQLSDIIWRCYQIAGPAETVATLDKLKELGFAEATKAGISIGISDMIIPKEKETELENAYKQIRQVEQQYRKGIITDGERYNKIIDIWTHAGDEISSAMFRTLEHNDGRKELNPVFLMVDSGSRGNRQQVRQLAGMRGLMAKPSGEIIERPITSNFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRKLVDAAQDVIINEKDCGTVNGIVVRSIYEGDEEVVDLGQRIIGRVSCETIADPVDKKKKIVKANQLIDEKIAAELQRVGVESLKIRSVLTCECGRGVCAMCYGRNLATGQYVKLGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASQTFKQPIIKAKNDGTVRFNDLRTVQALDGSWIALNKNGSISVHNAEGRELERYNVVIGSMISKGDGTDVKKGETFVQWDPYNVPILTDKGGKIEFRDMIAGVTIKRDVDEATGLMGTVIIEHKEDLHPQIVIVDDKKEVLASYSIPAGAHVIVEEGQKIRAGALLAKTPRKVAKTKDITGGLPRVAELFEARRPKDAAEIAKIDGVVEMGGTVRGKRRLILKDPDTGAEEEHLIPLTKHIIVFKGDFVKKGQQLTEGPVVPHEILEVCGPQDLQEHLVNEVQEVYRLQGVEINDKHIEIIVRQMLRKVKITDPGDTSLLWGDQVDKLDFEEENKKVVEKGGKPAEAVPVLLGITKASLETDSFISAASFQDTTRVLTEAATLGKVDKLRGFKENVIMGHLIPAGTGFPEHREIKLVEKGEPIGAAVMEEAEPQPAIG*