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PLM3_30_b2_sep16_scaffold_592

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_592_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_592_trna_1
unknown

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57..129
DNA (73bp)
transferRNA Thr
PLM3_30_b2_sep16_scaffold_592_2
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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200..1384
DNA (1185bp) protein (395aa)
elongation factor Tu Tax=Verrucomicrobium spinosum RepID=UPI0001745BD9
tufB; elongation factor Tu
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_592_trna_2
unknown

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1466..1538
DNA (73bp)
transferRNA Trp
PLM3_30_b2_sep16_scaffold_592_3
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1659..1877
DNA (219bp) protein (73aa)
Preprotein translocase, SecE subunit Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P3_9BACT
secE; preprotein translocase subunit SecE
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_592_4
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1881..2588
DNA (708bp) protein (236aa)
Transcription termination/antitermination protein NusG Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P2_9BACT
nusG; transcription antiterminator NusG
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_592_5
Methylacidiphilum kamchatkense, Methylacidiphilum, Methylacidiphilales, Verrucomicrobia, Bacteria

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2585..2842
DNA (258bp) protein (86aa)
50S ribosomal protein L11 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9P1_9BACT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia; Methylacidiphilales; Methylacidiphilaceae; Methylacidiphilum.;" source="Methylacidiphilum kamchatkense Kam1.;"
rplK; 50S ribosomal protein L11
PLM3_30_b2_sep16_scaffold_592_6
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2882..4534)
DNA (1653bp) protein (551aa)
Uncharacterized protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X6D2_ACISM
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
PLM3_30_b2_sep16_scaffold_592_7
unknown

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comp(4542..5552)
DNA (1011bp) protein (337aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_592_8
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

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comp(5549..7309)
DNA (1761bp) protein (587aa)
cocE_1; Cocaine esterase (EC:3.1.1.84)
peptidase S15; K06978 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Novosphingobium lindaniclasticum genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
PLM3_30_b2_sep16_scaffold_592_9
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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7523..9673
DNA (2151bp) protein (717aa)
ial:IALB_2399 hypothetical protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_30_b2_sep16_scaffold_592_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9875..10576
DNA (702bp) protein (234aa)
50S ribosomal protein L1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9L5_9BACT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
50S ribosomal protein L1
PLM3_30_b2_sep16_scaffold_592_11
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists


10602..11132
DNA (531bp) protein (177aa)
50S ribosomal protein L10 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9L4_9BACT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
50S ribosomal protein L10
PLM3_30_b2_sep16_scaffold_592_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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11999..15793
DNA (3795bp) protein (1265aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-directed RNA polymerase subunit beta Tax=Chthoniobacter flavus Ellin428 RepID=B4D9K6_9BACT
rpoB; DNA-directed RNA polymerase subunit beta
PLM3_30_b2_sep16_scaffold_592_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

15825..19943
DNA (4119bp) protein (1373aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA-directed RNA polymerase subunit beta' Tax=Chthoniobacter flavus Ellin428 RepID=B4D9K5_9BACT
rpoC; DNA-directed RNA polymerase subunit beta'
PLM3_30_b2_sep16_scaffold_592_14
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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20031..20576
DNA (546bp) protein (182aa)
ATP/cobalamin adenosyltransferase Tax=Chthoniobacter flavus Ellin428 RepID=B4D3G2_9BACT
ATP/cobalamin adenosyltransferase {ECO:0000313|EMBL:EDY18792.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ATP/cobalamin adenosyltransferase
PLM3_30_b2_sep16_scaffold_592_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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20680..21528
DNA (849bp) protein (283aa)
Conserved hypothetical secreted protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D187_9BACT
Conserved hypothetical secreted protein {ECO:0000313|EMBL:EDY20099.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_592_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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21534..22058
DNA (525bp) protein (175aa)
FMN-binding domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D186_9BACT
FMN-binding domain protein {ECO:0000313|EMBL:EDY20098.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
conserved protein of unknown function, putative FMN binding domain
PLM3_30_b2_sep16_scaffold_592_17
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22036..22947
DNA (912bp) protein (304aa)
probable thiamine biosynthesis lipoprotein apbe precursor transmembrane Tax=Verrucomicrobium spinosum RepID=UPI0001745D98
putative thiamine biosynthesis HESIS lipoprotein APBE transmenbrane
Tax=RBG_16_Gamma2_60_9_curated
PLM3_30_b2_sep16_scaffold_592_18
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22896..23327
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0S5Z1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD89618.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
putative transmembrane protein
Displaying 20 items

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