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PLM3_30_b2_sep16_scaffold_2919_9

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: comp(5748..7385)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 552.0
  • Bit_score: 769
  • Evalue 1.90e-219
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 552.0
  • Bit_score: 769
  • Evalue 2.60e-219
RpoD family RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 536.0
  • Bit_score: 677
  • Evalue 2.10e-192

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1638
ATGGTAGCGTCTCGTTTGTACTCAGCGATTGAATTGCAGAGCCGCATTCGCGAACTCATCAAGCTCGCAAAGGAACAAGGTTATCTCACTTTTGACGACTTAAATGAGGCGTTGCCCGAGGGAATCACTGACGCCGATGAATTGGACCTTATCCTCACGCGGCTGCGTCGCCTGGAGATCGACATTATCGAAGCGTCGGAAGTCGATCGGTACAAGGATGGCAAAAAAGATACAGAGGAGGATCTGGAAGAGGAAGAGCGACCCGAAACCAAGGTCGATATTCTGGACGACCCGGTGCGGATGTATCTCAAGCAGATGGGCCAGGTGCCCCTGCTGACCCGCGAACAGGAAGTAGAAATATCCAAACGCATCGAGGAAGCCGAAGACATGGTGCTGAAGCACATCAATCGCTTCGGTTTTATCGCGCAGGCTCACCTGGATCTTGCCGGGAAGCTGATCGAGGGCAGGGAACGGTTCGATCGGGTAATTCTCGACAAGAAAATTGAGAGCCGGGAGAGGTATATGAAAAATCTCCCGCGGCTCTGCAAACAGGTGGAACAATTAAGCGTGTCGATCACGCGGCAGTTTTGCGAGGCCGCGCGCAATTCTTCAAAAAAACGACCGCAGAAGCTCCGGGCGTTGCAAAGGATGATGACTTCGTTGCAAAGGCTTTATCCGCTTTTTTATCTCAAGCAGAAGGTCACAGAGGAGTTTGTGCACCTGGCGGATGACGCACATCATACTTCGCTTTACCTGCAAGCCGAGCTGGCCAAAAATCCTCGCAGCAAGAAACGGCGATTGCAGCTTCAGAATAAAATCCGAGAGCTGGAAAAAGGGCTGTGGTTCTCGCTTGCCGAATATGCGAAGGAGTACCAGATGCTTAAGAGCTGGATGCGCCAAGCATTCAAGGCCAAAACCGAAATGGTGGAAGCCAACCTTCGTCTCGTTATCTCGATCGCAAAAAAGTACACCAACCGCGGTCTATCCTTCCTCGACCTAATCCAGGAAGGAAACATGGGGTTGATGAAGGCGGTTGAGAAGTTTGAGTATCGACGGGGCTACAAGTTTTCCACGTACGCGACATGGTGGATTCGCCAGGCCATTACCCGCTCAATTGCCGATCAGGCGCGCACGATTCGCATCCCGGTCCACATGATTGAGACCATTAATAAGCTCATGCGTGTGCAAAAACAGCTGGTGCAGGAATATGGGCGCGAGCCCTCGCCCGAGGAAGTCGCCGAAGAGGTCCTGCTACCAGTAGATCGCGTGCGGTCAGTCCTCAAGATGGCGCAGCAACCAATCTCGCTTCAGTCGCCGGTAGGCGAGAGCGAGGAGACCAATTTTGGCGATTTTATCGAAGACAGGGGTGCCGAAAATCCGAGCGACATGACTGCGATTGTCTTGTTGAAGGAAAAAATCAAAGACGTGCTGGAGACGCTCACCGATCGTGAAAGGCAAGTCCTCGAGCAACGATTTGGACTGGTTGATGGATATAGCCGAACGTTGGAAGAAGTAGGCCGGCAGTTTCAGGTCACTCGCGAGCGTATTCGCCAGATCGAAGCAAAGGCCTTGCGTAAAATGCGGCACCCAACTCGTATTCGGCAACTCGAAGGCTTCCTTGAGGCTCCTGGACTGTGA
PROTEIN sequence
Length: 546
MVASRLYSAIELQSRIRELIKLAKEQGYLTFDDLNEALPEGITDADELDLILTRLRRLEIDIIEASEVDRYKDGKKDTEEDLEEEERPETKVDILDDPVRMYLKQMGQVPLLTREQEVEISKRIEEAEDMVLKHINRFGFIAQAHLDLAGKLIEGRERFDRVILDKKIESRERYMKNLPRLCKQVEQLSVSITRQFCEAARNSSKKRPQKLRALQRMMTSLQRLYPLFYLKQKVTEEFVHLADDAHHTSLYLQAELAKNPRSKKRRLQLQNKIRELEKGLWFSLAEYAKEYQMLKSWMRQAFKAKTEMVEANLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLMRVQKQLVQEYGREPSPEEVAEEVLLPVDRVRSVLKMAQQPISLQSPVGESEETNFGDFIEDRGAENPSDMTAIVLLKEKIKDVLETLTDRERQVLEQRFGLVDGYSRTLEEVGRQFQVTRERIRQIEAKALRKMRHPTRIRQLEGFLEAPGL*