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PLM3_30_b2_sep16_scaffold_2919

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_2919_1
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..189
DNA (189bp) protein (63aa)
Aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase 1 Tax=Herbaspirillum sp. YR522 RepID=J3HVZ9_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM3_30_b2_sep16_scaffold_2919_2
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(178..780)
DNA (603bp) protein (201aa)
Putative uncharacterized protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D932_MYXXD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF90260.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
PLM3_30_b2_sep16_scaffold_2919_3
unknown

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comp(856..1584)
DNA (729bp) protein (243aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_2919_4
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(1663..2577)
DNA (915bp) protein (305aa)
Tetratricopeptide TPR_2 repeat protein Tax=Chthoniobacter flavus Ellin428 RepID=B4CUH3_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EDY22211.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
nrfG; TPR repeats containing protein
PLM3_30_b2_sep16_scaffold_2919_trna_1
unknown

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3095..3166
DNA (72bp)
transferRNA His
PLM3_30_b2_sep16_scaffold_2919_trna_2
unknown

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3180..3253
DNA (74bp)
transferRNA Arg
PLM3_30_b2_sep16_scaffold_2919_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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3406..4410
DNA (1005bp) protein (335aa)
Riboflavin biosynthesis protein RibD Tax=Chthoniobacter flavus Ellin428 RepID=B4D449_9BACT
Riboflavin biosynthesis protein RibD {ECO:0000313|EMBL:EDY18650.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
riboflavin biosynthesis protein RibD
PLM3_30_b2_sep16_scaffold_2919_6
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4462..4722
DNA (261bp) protein (87aa)
Putative uncharacterized protein Tax=Branchiostoma floridae RepID=C3YHC7_BRAFL
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
PLM3_30_b2_sep16_scaffold_2919_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(4825..5193)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D737_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17688.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM3_30_b2_sep16_scaffold_2919_8
unknown

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comp(5345..5569)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_2919_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(5748..7385)
DNA (1638bp) protein (546aa)
RNA polymerase sigma factor SigA Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV6_9BACT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
RpoD family RNA polymerase sigma-70 subunit
PLM3_30_b2_sep16_scaffold_2919_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(7680..9371)
DNA (1692bp) protein (564aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
DNA primase Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT
DNA primase
PLM3_30_b2_sep16_scaffold_2919_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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9650..10996
DNA (1347bp) protein (449aa)
Membrane-bound serine protease, NfeD family bin=GWF2_Lentisphaerae_57_35 species=Methylacidiphilum fumariolicum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
nfeD; membrane-bound serine protease, NfeD family
Tax=GWF2_Lentisphaerae_57_35_curated
PLM3_30_b2_sep16_scaffold_2919_12
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11026..11226)
DNA (201bp) protein (67aa)
Thiamine biosynthesis protein ThiS Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW3_9BACT
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:EDY21283.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiamine biosynthesis protein ThiS
PLM3_30_b2_sep16_scaffold_2919_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(11223..12353)
DNA (1131bp) protein (377aa)
Thiazole biosynthesis protein ThiH Tax=Chthoniobacter flavus Ellin428 RepID=B4CWW4_9BACT
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EDY21284.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
thiH; thiamine biosynthesis enzyme ThiH
PLM3_30_b2_sep16_scaffold_2919_14
unknown

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comp(12482..13165)
DNA (684bp) protein (228aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_2919_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(13323..13691)
DNA (369bp) protein (123aa)
Ribonuclease, Rne/Rng family Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U4_9BACT
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:EDY18547.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
ribonuclease
Displaying 17 items

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