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PLM3_30_b2_sep16_scaffold_3927_10

Organism: PLM3_30_b2_sep16_Chthoniobacter_flavus_54_8

near complete RP 43 / 55 MC: 2 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 7945..8427

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 139.0
  • Bit_score: 213
  • Evalue 1.30e-52
tRNA pseudouridine synthase B Tax=Chthoniobacter flavus Ellin428 RepID=B4CYQ5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 139.0
  • Bit_score: 213
  • Evalue 8.90e-53
truB; pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 61.2
  • Coverage: 139.0
  • Bit_score: 183
  • Evalue 2.80e-44

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 483
ATGTCTCATCCTTTGGCTCCTGACGGCGTCCTGCTGGTTGACAAGGCTGAAGGGATGACTTCGCACGACGTGGTGGCGCTAGTCCGTAGAAAGCTTCAGATCAGGAAAGTCGGCCATTGCGGCACGCTTGACCCCATAGCGACCGGCTTGCTCTTGATCACGATCGGACGGGGCACAAAGGTCCAGGATTTACTCATGAGCGAAGACAAGGAATACGCCGGTACATTCGTCCTCGGAGTGACGACCGATACACAGGATCGGCAGGGAGAGGTAATTCAGCAACGACCAGTTCCCGCGCTGGACGAAACTCAAATTGGCGCCGCATTTGAAAAATTTCGTGGCGATTTTTATCAAATGCCGCCGATGGTTTCGGCAAAAAAGCACGGCGGCGTACCGCTGTACAAGCTGGCGCGCCAGGGAAAAGTGGTCGAGCGCGAGGTTTTTACGTTCGTACTTATGCTCACGACATTGGTGAGACCTTAG
PROTEIN sequence
Length: 161
MSHPLAPDGVLLVDKAEGMTSHDVVALVRRKLQIRKVGHCGTLDPIATGLLLITIGRGTKVQDLLMSEDKEYAGTFVLGVTTDTQDRQGEVIQQRPVPALDETQIGAAFEKFRGDFYQMPPMVSAKKHGGVPLYKLARQGKVVEREVFTFVLMLTTLVRP*