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PLM3_30_b2_sep16_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_97_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3..191
DNA (189bp) protein (63aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

201..1016
DNA (816bp) protein (272aa)
Phosphomethylpyrimidine kinase Tax=uncultured prokaryote RepID=H5SLW4_9ZZZZ
phosphomethylpyrimidine kinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_3
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(1065..1256)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EHM2_9ACTO
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F0400.;"
50S ribosomal protein L28
PLM3_30_b2_sep16_scaffold_97_4
unknown

Not on your lists

1360..1959
DNA (600bp) protein (200aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_97_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(1944..5924)
DNA (3981bp) protein (1327aa)
adenylate/guanylate cyclase bin=bin8_Chloro species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
guanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM3_30_b2_sep16_scaffold_97_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(6000..6500)
DNA (501bp) protein (167aa)
membrane protein Tax=Thermus igniterrae RepID=UPI0003791450
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6525..8762
DNA (2238bp) protein (746aa)
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG Tax=Ilumatobacter coccineus YM16-304 RepID=M5A090_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8759..9313
DNA (555bp) protein (185aa)
hypothetical protein Tax=Actinoalloteichus spitiensis RepID=UPI000380FB37
methyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9314..9799
DNA (486bp) protein (162aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase Tax=Aeromicrobium marinum DSM 15272 RepID=E2SAZ0_9ACTO
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9800..10348
DNA (549bp) protein (183aa)
hypothetical protein Tax=Streptomyces sp. S4 RepID=UPI0002493B17
Hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10348..10896
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=Kocuria palustris PEL RepID=M2YBY8_9MICC
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


10908..11084
DNA (177bp) protein (59aa)
50S ribosomal protein L32 Tax=Patulibacter americanus RepID=UPI0003B6E2A6
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11088..11885
DNA (798bp) protein (266aa)
ribonuclease III (EC:3.1.26.3)
ribonuclease III Tax=Nocardiopsis sp. CNS639 RepID=UPI00037A331E
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11885..12727
DNA (843bp) protein (281aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003825E22
formamidopyrimidine-DNA glycosylase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(12740..13330)
DNA (591bp) protein (197aa)
Nicotinamidase-like amidase bin=GWC2_Chloroflexi_73_18 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
isochorismatase hydrolase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_30_b2_sep16_scaffold_97_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13348..13617
DNA (270bp) protein (90aa)
Acylphosphatase Tax=Halorubrum californiensis DSM 19288 RepID=M0ECE7_9EURY
acylphosphatase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13892..17101
DNA (3210bp) protein (1070aa)
Chromosome partition protein Smc Tax=Thermobifida fusca (strain YX) RepID=Q47S74_THEFY
condensin subunit Smc
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17113..18138
DNA (1026bp) protein (342aa)
cell division protein FtsY Tax=Streptomyces sp. ATexAB-D23 RepID=UPI000370AFB8
signal recognition particle-docking protein FtsY
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

18184..18537
DNA (354bp) protein (118aa)
Two-component system, OmpR family, phosphate regulon response regulator PhoB Tax=Glaciecola lipolytica E3 RepID=K6YFJ1_9ALTE
two component transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


18549..19568
DNA (1020bp) protein (340aa)
Signal recognition particle protein Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QBH2_9FIRM
signal recognition particle subunit FFH/SRP54 (srp54)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


19796..20086
DNA (291bp) protein (97aa)
30S ribosomal protein S16 Tax=Alicyclobacillus acidocaldarius RepID=C8WWA8_ALIAD
30S ribosomal protein S16
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20115..20384
DNA (270bp) protein (90aa)
hypothetical protein; K06960 bin=bin9_gal15 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20421..20930
DNA (510bp) protein (170aa)
Ribosome maturation factor RimM Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I983_CALAS
rimM; Ribosome maturation factor RimM
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

20981..21655
DNA (675bp) protein (225aa)
tRNA (guanine-N(1)-)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin9_gal15 organism_group=GAL15
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


21758..22348
DNA (591bp) protein (197aa)
50S ribosomal protein L19 Tax=Saccharopolyspora spinosa RepID=UPI000237AFED
rplS; 50S ribosomal protein L19
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22352..23011
DNA (660bp) protein (220aa)
signal peptidase I (EC:3.4.21.89)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI000347C03C
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22999..23643
DNA (645bp) protein (215aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000367E8C3
putative ribonuclease HII
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_28
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

23640..23945
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SDZ9_GEOOG
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_97_29
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24057..27539
DNA (3483bp) protein (1161aa)
hypothetical protein Tax=Cellulomonas sp. JC225 RepID=UPI000371E0F4
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACV78616.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_30_b2_sep16_scaffold_97_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

27634..28002
DNA (369bp) protein (123aa)
hypothetical protein Tax=Actinomycetospora chiangmaiensis RepID=UPI00037AAD96
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying items 1-30 of 43 in total

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