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PLM3_30_b2_sep16_scaffold_112

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_112_1
RLO_PLX_64_10, Bacteria

Not on your lists

comp(3..863)
DNA (861bp) protein (287aa)
WD40-like Beta Propeller bin=GWA2_Ignavibacteria_55_11 species=Bacillus cereus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
WD40 domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_30_b2_sep16_scaffold_112_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(856..1371)
DNA (516bp) protein (172aa)
RNA polymerase sigma factor Tax=Streptomyces acidiscabies RepID=UPI000287E50A
RNA polymerase ECF-subfamily sigma factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_3
unknown

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2001..2441
DNA (441bp) protein (147aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_112_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2468..2764
DNA (297bp) protein (99aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2832..3620)
DNA (789bp) protein (263aa)
RIO-like kinase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TT03_9CHLR
serine/threonine protein kinase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3841..4224)
DNA (384bp) protein (128aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4404..5741
DNA (1338bp) protein (446aa)
DNA repair protein radA Tax=Methylosinus trichosporium OB3b RepID=D5QNE8_METTR
radA; DNA repair protein RadA-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5867..6376
DNA (510bp) protein (170aa)
Transcriptional regulator, CarD family Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1Q9_ACIFD
CarD family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6470..7273
DNA (804bp) protein (268aa)
PilT protein domain protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LQZ5_ACIC1
PilT domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7270..7560
DNA (291bp) protein (97aa)
Uncharacterized protein Tax=Dialister sp. CAG:357 RepID=R7CSL3_9FIRM
PIN/TRAM domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7570..8238
DNA (669bp) protein (223aa)
Bifunctional enzyme IspD/IspF Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAB3_NAKMY
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8235..8711
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Firmicutes bacterium CAG:129 RepID=R5S5L7_9FIRM
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8708..9445
DNA (738bp) protein (246aa)
RNA methyltransferase, TrmH family, group 3 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTH5_9FIRM
TrmH family RNA methyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_trna_1
unknown

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9514..9585
DNA (72bp)
transferRNA Thr
PLM3_30_b2_sep16_scaffold_112_14
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10479..10751
DNA (273bp) protein (91aa)
hypothetical protein Tax=Mycobacterium sp. 360MFTsu5.1 RepID=UPI00036C413A
Mycobacterium llatzerense strain CLUC14 Mllat_contig000021, whole genome shotgun sequence {ECO:0000313|EMBL:KIU15973.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_112_15
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11456..11683
DNA (228bp) protein (76aa)
GCN5-related N-acetyltransferase Tax=Amycolatopsis azurea DSM 43854 RepID=M2QV04_9PSEU
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EMD29817.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
GCN5 family acetyltransferase
PLM3_30_b2_sep16_scaffold_112_16
unknown

Not on your lists

comp(11887..12231)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_112_17
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

13097..14053
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U9A6_OCEP5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADR36935.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
PLM3_30_b2_sep16_scaffold_112_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(14144..16315)
DNA (2172bp) protein (724aa)
hypothetical protein
Diguanylate cyclase bin=GWC2_Chloroflexi_73_18 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16416..21224
DNA (4809bp) protein (1603aa)
NAD-specific glutamate dehydrogenase Tax=Patulibacter medicamentivorans RepID=H0E264_9ACTN
NAD-glutamate dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_20
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21288..21566
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B7N6_STRRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ91557.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM3_30_b2_sep16_scaffold_112_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

21583..22173
DNA (591bp) protein (197aa)
Putative uncharacterized protein Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UJ76_CELFN
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22214..22900
DNA (687bp) protein (229aa)
Trehalose-phosphatase Tax=Frankia sp. (strain EuI1c) RepID=E3J4Q9_FRASU
trehalose-phosphatase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_112_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(22897..24075)
DNA (1179bp) protein (393aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
alpha,alpha-trehalose-phosphate synthase Tax=Nocardiopsis sp. CNS639 RepID=UPI000360C6C2
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 24 items

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