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PLM3_30_b2_sep16_scaffold_148

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_148_1
unknown

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3..203
DNA (201bp) protein (67aa)
lipoprotein, Med/BMP family
PLM3_30_b2_sep16_scaffold_148_2
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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224..1756
DNA (1533bp) protein (511aa)
Nucleoside ABC transporter ATP-binding protein Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1T4_THEOJ
nucleoside ABC transporter ATP-binding protein
Nucleoside ABC transporter ATP-binding protein {ECO:0000313|EMBL:ADL07361.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
PLM3_30_b2_sep16_scaffold_148_3
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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1757..2998
DNA (1242bp) protein (414aa)
Putative sugar ABC transporter, permease protein Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABW8_CARHZ
sugar ABC transporter permease
Putative sugar ABC transporter, permease protein {ECO:0000313|EMBL:ABB16046.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
PLM3_30_b2_sep16_scaffold_148_4
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2998..3972
DNA (975bp) protein (325aa)
Nucleoside ABC transporter membrane protein Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S1T6_THEOJ
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein {ECO:0000313|EMBL:ADL07363.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
PLM3_30_b2_sep16_scaffold_148_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(3991..4608)
DNA (618bp) protein (206aa)
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase Tax=Opitutaceae bacterium TAV5 RepID=H1IN42_9BACT
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4872..5897
DNA (1026bp) protein (342aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8U3_THECD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_7
Streptomyces griseorubens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5920..6606)
DNA (687bp) protein (229aa)
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI0003720077
Membrane protein {ECO:0000313|EMBL:KEG44184.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseorubens.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_148_8
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6603..7634)
DNA (1032bp) protein (344aa)
Putative membrane protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KJB2_9ACTO
Putative membrane protein {ECO:0000313|EMBL:EKX60565.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
integral membrane protein
PLM3_30_b2_sep16_scaffold_148_9
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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7757..9643
DNA (1887bp) protein (629aa)
5'-nucleotidase; K01081 5'-nucleotidase [EC:3.1.3.5] bin=bin8_Chloro species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
5'-nucleotidase domain-containing protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM3_30_b2_sep16_scaffold_148_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(9691..10467)
DNA (777bp) protein (259aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(10547..11731)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IHJ8_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

11820..12245
DNA (426bp) protein (142aa)
Molybdopterin biosynthesis MoaE protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJF4_9CHLR
molybdopterin biosynthesis MoaE protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12268..13275
DNA (1008bp) protein (336aa)
Rod shape-determining protein MreB Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZX26_9ACTN
mreB; rod shape-determining protein MreB
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_14
unknown

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comp(13300..13614)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_148_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13684..14658
DNA (975bp) protein (325aa)
Putative ATP-dependant serine protease protein containing a PDZ domain, family S16 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CQ94_CLAM3
ATP-dependent serine protease
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14739..17681
DNA (2943bp) protein (981aa)
UPF0182 protein DAMO_1249 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEY0_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_148_17
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

17766..18848
DNA (1083bp) protein (361aa)
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_30_b2_sep16_scaffold_148_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

18857..19249
DNA (393bp) protein (131aa)
Blue (Type 1) copper domain protein (Fragment) Tax=mine drainage metagenome RepID=T1CE21_9ZZZZ
copper-binding protein
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_30_b2_sep16_scaffold_148_trna_1
unknown

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19296..19369
DNA (74bp)
transferRNA Met
PLM3_30_b2_sep16_scaffold_148_19
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19443..19649)
DNA (207bp) protein (69aa)
Site-specific recombinase, phage integrase family Tax=Oscillibacter RepID=U2QNU7_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK64585.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
integrase protein
PLM3_30_b2_sep16_scaffold_148_20
unknown

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comp(19646..19786)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 21 items

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