ggKbase home page

PLM3_30_b2_sep16_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_170_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1..405
DNA (405bp) protein (135aa)
Ferrochelatase Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIH4_THEM7
ferrochelatase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_170_2
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

426..1847
DNA (1422bp) protein (474aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ACZ39748.1}; EC=1.3.3.4 {ECO:0000313|EMBL:ACZ39748.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Protoporphyrinogen oxidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7A2_SPHTD
PLM3_30_b2_sep16_scaffold_170_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1844..2506
DNA (663bp) protein (221aa)
Chlorite dismutase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F509_CONWI
chlorite dismutase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_170_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2730..2843
DNA (114bp) protein (38aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_170_5
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

2847..3899
DNA (1053bp) protein (351aa)
leucine dehydrogenase (EC:1.4.1.9)
Leucine dehydrogenase Tax=Bhargavaea cecembensis DSE10 RepID=M7NDQ2_9BACL
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_30_b2_sep16_scaffold_170_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

3899..4246
DNA (348bp) protein (116aa)
Putative pterin-4-alpha-carbinolamine dehydratase Tax=Pedosphaera parvula Ellin514 RepID=B9XL35_9BACT
transcriptional coactivator/pterin dehydratase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_30_b2_sep16_scaffold_170_7
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(4256..4777)
DNA (522bp) protein (174aa)
methionine-S-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401, ECO:0000313|EMBL:CCW34341.1};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Peptide methionine sulfoxide reductase MsrA Tax=Chthonomonas calidirosea T49 RepID=S0ESN5_9BACT
PLM3_30_b2_sep16_scaffold_170_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4921..6639
DNA (1719bp) protein (573aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI00037FE01D
Peptidase S8 {ECO:0000313|EMBL:ETK33893.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peptidase S8 and S53 subtilisin kexin sedolisin
PLM3_30_b2_sep16_scaffold_170_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6700..7974)
DNA (1275bp) protein (425aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000255|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000255|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000255|HAMAP-Rule:MF_00375}; Short=GSA-AT {ECO:0000255|HAMAP-Rule:MF_00375};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=GSA_RUBXD
PLM3_30_b2_sep16_scaffold_170_10
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7982..8971)
DNA (990bp) protein (330aa)
Porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Delta-aminolevulinic acid dehydratase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A490_THECD
PLM3_30_b2_sep16_scaffold_170_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(8977..9720)
DNA (744bp) protein (248aa)
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W5L9_KINRD
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_30_b2_sep16_scaffold_170_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9717..10610)
DNA (894bp) protein (298aa)
hemC; porphobilinogen deaminase (EC:2.5.1.61)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037DA160
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_170_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(10607..11878)
DNA (1272bp) protein (424aa)
Glutamyl-tRNA reductase Tax=Mycobacterium leprae RepID=HEM1_MYCLE
hemA; glutamyl-tRNA reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_170_14
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

12010..13110
DNA (1101bp) protein (367aa)
Peptidase S58 DmpA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8L6_CONWI
peptidase S58 DmpA
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_30_b2_sep16_scaffold_170_15
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13130..14347)
DNA (1218bp) protein (406aa)
FAD dependent oxidoreductase Tax=Streptomyces hygroscopicus subsp. jinggangensis RepID=H2JL09_STRHJ
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEY93896.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_30_b2_sep16_scaffold_170_trna_1
unknown

Not on your lists

14390..14478
DNA (89bp)
transferRNA Ser
PLM3_30_b2_sep16_scaffold_170_16
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14643..14825
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Frankia sp. QA3 RepID=I8QMQ6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV93707.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_170_17
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14917..15549
DNA (633bp) protein (211aa)
Putative uncharacterized protein Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QDW5_CATAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU76553.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3_30_b2_sep16_scaffold_170_18
unknown

Not on your lists

15872..16219
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_trna_2
unknown

Not on your lists

16303..16375
DNA (73bp)
transferRNA Arg
PLM3_30_b2_sep16_scaffold_170_19
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

17228..18445
DNA (1218bp) protein (406aa)
PREDICTED: spore wall protein 2-like Tax=Anas platyrhynchos RepID=UPI000350E505
Transmembrane protein, putative {ECO:0000313|EMBL:EAS07705.1}; species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;" source="Tetrahymena thermophila (strain SB210).;"
Collagen domain protein
PLM3_30_b2_sep16_scaffold_170_20
unknown

Not on your lists

19459..19830
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_21
unknown

Not on your lists

comp(19926..20069)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_22
unknown

Not on your lists

20433..21194
DNA (762bp) protein (254aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_23
unknown

Not on your lists

comp(22151..23086)
DNA (936bp) protein (312aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_24
unknown

Not on your lists

comp(23121..23273)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_25
unknown

Not on your lists

comp(24227..24352)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_26
unknown

Not on your lists

comp(24523..24768)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_170_27
Fusarium oxysporum, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

25262..25999
DNA (738bp) protein (246aa)
Uncharacterized protein Tax=Fusarium oxysporum f. sp. cubense (strain race 4) RepID=N1RDV1_FUSC4
Uncharacterized protein {ECO:0000313|EMBL:ENH72690.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.;" source="Fusarium oxysporum f. sp. cubense (strain race 1) (Panama disease; fungus).;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_170_28
unknown

Not on your lists

26022..26654
DNA (633bp) protein (211aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

View Taxonomy