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PLM3_30_b2_sep16_scaffold_188

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_188_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3..467
DNA (465bp) protein (155aa)
DeoR family transcriptional regulator Tax=Micromonospora sp. CNB394 RepID=UPI00037E9D6E
diacylglycerol kinase catalytic subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(464..1234)
DNA (771bp) protein (257aa)
phosphoadenosine phosphosulfate reductase (EC:1.8.4.8)
Phosphoadenosine phosphosulfate reductase Tax=Persephonella marina (strain DSM 14350 / EX-H1) RepID=C0QUE3_PERMH
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1339..2508
DNA (1170bp) protein (390aa)
sulfate adenylyltransferase (EC:2.7.7.4)
Sulfate adenylyltransferase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDF6_THET1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2667..3623
DNA (957bp) protein (319aa)
putative metalloendopeptidase (EC:3.4.24.-)
Putative metalloendopeptidase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4P8_9ACTN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_5
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3686..4216
DNA (531bp) protein (177aa)
aerial mycelium formation protein Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000368A8C6
amfC; aerial mycelium formation protein
Aerial mycelium formation protein {ECO:0000313|EMBL:AIJ27000.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
PLM3_30_b2_sep16_scaffold_188_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4905..5114
DNA (210bp) protein (70aa)
Metal dependent phosphohydrolase bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
GGDEF: diguanylate cyclase (GGDEF) domain
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5161..6144
DNA (984bp) protein (328aa)
L-asparaginase II Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A575_CELGA
L-asparaginase II
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6189..7493
DNA (1305bp) protein (435aa)
D-inositol 3-phosphate glycosyltransferase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=MSHA_ACIC1
group 1 glycosyl transferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8029..8751
DNA (723bp) protein (241aa)
TetR family transcriptional regulator Tax=Oceanobacillus kimchii RepID=UPI000347ED51
Transcriptional regulator, TetR family
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8748..9599
DNA (852bp) protein (284aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A4B2_THECD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9794..10507)
DNA (714bp) protein (238aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

10730..12289
DNA (1560bp) protein (520aa)
Aldehyde dehydrogenase bin=GWC2_Chloroflexi_73_18 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
aldehyde dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12286..13572
DNA (1287bp) protein (429aa)
acetylornithine transaminase (EC:2.6.1.11)
Acetylornithine aminotransferase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W7X1_ACTMD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13588..13962
DNA (375bp) protein (125aa)
Putative uncharacterized protein Tax=Isoptericola variabilis (strain 225) RepID=F6FPM0_ISOV2
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_15
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

13959..14909
DNA (951bp) protein (317aa)
catI; 3-oxoadipate:succinyl-CoA transferase subunit A (EC:2.8.3.6)
3-oxoadipate:succinyl-CoA transferase, A subunit bin=GWC2_Chloroflexi_73_18 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_30_b2_sep16_scaffold_188_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

14926..15696
DNA (771bp) protein (257aa)
catJ; 3-oxoadipate CoA-transferase (EC:2.8.3.6)
3-oxoadipate CoA-transferase bin=GWC2_Chloroflexi_73_18 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_30_b2_sep16_scaffold_188_17
unknown

Not on your lists

15699..15938
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_188_18
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

15935..17251
DNA (1317bp) protein (439aa)
Aminotransferase class-III bin=GWC2_Chloroflexi_73_18 species=Actinosynnema mirum genus=Actinosynnema taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
class III aminotransferase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_30_b2_sep16_scaffold_188_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

17248..18396
DNA (1149bp) protein (383aa)
Histone deacetylase superfamily Tax=Frankia sp. (strain EAN1pec) RepID=A8L6L1_FRASN
histone deacetylase superfamily protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_20
unknown

Not on your lists

18414..18584
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_188_21
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18587..19042)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000378832F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB30509.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_30_b2_sep16_scaffold_188_22
unknown

Not on your lists

comp(19067..20293)
DNA (1227bp) protein (409aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_188_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(20293..21078)
DNA (786bp) protein (262aa)
oxidoreductase Tax=Salisaeta longa RepID=UPI0003B323D6
oxidoreductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

21149..21976
DNA (828bp) protein (276aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI000361837B
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22232..23122
DNA (891bp) protein (297aa)
GTPase or GTP-binding protein-like protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BZ19_NITHN
GTPase or GTP-binding protein-like protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_26
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23134..23235
DNA (102bp) protein (34aa)
Uncharacterized protein Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GG40_PROFC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL57501.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 /; CIP 103027 / CIRM-BIA1).;"
PLM3_30_b2_sep16_scaffold_188_27
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

23247..23996
DNA (750bp) protein (250aa)
hypothetical protein; K06889 bin=bin9_gal15 species=Chitiniphilus shinanonensis genus=Chitiniphilus taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_28
unknown

Not on your lists

comp(24000..24152)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_188_29
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(24211..25011)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Nocardiopsis halotolerans RepID=UPI0003472D1F
Xylose isomerase domain-containing protein TIM barrel
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_188_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

25018..25749
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4ELP2_9CHLR
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying items 1-30 of 41 in total

View Taxonomy