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PLM3_30_b2_sep16_scaffold_268

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_268_1
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..820)
DNA (819bp) protein (273aa)
Beta-lactamase class B Tax=Amycolatopsis mediterranei RepID=D8HYP8_AMYMU
beta-lactamase class B
Beta-lactamase class B {ECO:0000313|EMBL:AEK45101.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM3_30_b2_sep16_scaffold_268_2
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(846..1289)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W4M2_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44153.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM3_30_b2_sep16_scaffold_268_3
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1428..4199
DNA (2772bp) protein (924aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003787ECF
Regulatory protein LuxR {ECO:0000313|EMBL:CDO87590.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
LuxR family transcriptional regulator
PLM3_30_b2_sep16_scaffold_268_4
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4386..4829
DNA (444bp) protein (148aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003804D19
Uncharacterized protein {ECO:0000313|EMBL:KIM17517.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis (Arthrobacter picolinophilus).;"
4-oxalocrotonate tautomerase family protein
PLM3_30_b2_sep16_scaffold_268_5
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4998..5504
DNA (507bp) protein (169aa)
Peroxiredoxin (EC:1.11.1.15)
Peroxiredoxin Tax=Natrialba aegyptia DSM 13077 RepID=M0AK78_9EURY
Peroxiredoxin {ECO:0000313|EMBL:ELY98771.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
PLM3_30_b2_sep16_scaffold_268_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5501..6052
DNA (552bp) protein (184aa)
DSBA oxidoreductase Tax=Fischerella sp. PCC 9339 RepID=UPI0002FB0CEE
protein-disulfide isomerase
Protein-disulfide isomerase {ECO:0000313|EMBL:AIF83220.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3_30_b2_sep16_scaffold_268_7
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6282..7418
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI0002F37135
Hydrolase {ECO:0000313|EMBL:KJC50564.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
family 3 adenylate cyclase
PLM3_30_b2_sep16_scaffold_268_8
Mycobacterium chubuense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7617..8207)
DNA (591bp) protein (197aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000360AC62
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM17017.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium chubuense (strain NBB4).;"
PLM3_30_b2_sep16_scaffold_268_9
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8351..8872)
DNA (522bp) protein (174aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B5D2F3
Uncharacterized protein {ECO:0000313|EMBL:EJI97515.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_268_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(9236..9901)
DNA (666bp) protein (222aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI0003635D44
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_268_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(9850..10428)
DNA (579bp) protein (193aa)
membrane protein Tax=Nocardiopsis sp. CNS639 RepID=UPI00036FAE56
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_268_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(10682..10993)
DNA (312bp) protein (104aa)
id=3864198 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_30_b2_sep16_scaffold_268_13
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(11005..11460)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Thermus oshimai RepID=UPI00036B141F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFV76705.1}; Flags: Precursor;; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-2.;"
PLM3_30_b2_sep16_scaffold_268_trna_1
unknown

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11604..11676
DNA (73bp)
transferRNA Thr
PLM3_30_b2_sep16_scaffold_268_trna_2
unknown

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11758..11829
DNA (72bp)
transferRNA Met
PLM3_30_b2_sep16_scaffold_268_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


11913..12077
DNA (165bp) protein (55aa)
50S ribosomal protein L33 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2V7_ACIFD
50S ribosomal protein L33
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_268_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(12087..12860)
DNA (774bp) protein (258aa)
chemotaxis protein CheY Tax=Streptomyces sp. CNB091 RepID=UPI0003711691
two-component system response regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_268_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13014..13412
DNA (399bp) protein (133aa)
UPF0336 protein C884_01172 Tax=Kocuria palustris PEL RepID=M2XYC5_9MICC
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_268_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13409..13831
DNA (423bp) protein (141aa)
(3R)-hydroxyacyl-ACP dehydratase subunit HadB Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X6I0_9NOCA
MaoC domain-containing protein dehydratase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_268_18
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(13862..15649)
DNA (1788bp) protein (596aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 20 items

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