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PLM3_30_b2_sep16_scaffold_422

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_422_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(171..644)
DNA (474bp) protein (158aa)
Transcriptional repressor NrdR Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R0H6_CLOB3
nrdR; transcriptional regulator NrdR
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_2
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(703..1032)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2W1_CONWI
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB54242.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_30_b2_sep16_scaffold_422_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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comp(1029..1391)
DNA (363bp) protein (121aa)
Activator of Hsp90 ATPase 1 family protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U048_9CHLR
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:EFH82188.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM3_30_b2_sep16_scaffold_422_4
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

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1503..2162
DNA (660bp) protein (220aa)
Endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7LYA2_ACIFD
Tax=CG_Solirubrobact_01
PLM3_30_b2_sep16_scaffold_422_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2135..2395)
DNA (261bp) protein (87aa)
Peptidoglycan-binding LysM Tax=Thermobifida fusca RepID=Q47MY5_THEFY
peptidoglycan-binding LysM
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2537..3190
DNA (654bp) protein (218aa)
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SK55_THEM7
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3244..4227
DNA (984bp) protein (328aa)
hypothetical protein Tax=Curtobacterium ginsengisoli RepID=UPI0003B4A8EE
sugar isomerase (SIS)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_8
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4232..5245)
DNA (1014bp) protein (338aa)
NADP oxidoreductase (Fragment) Tax=Bacillus sp. EGD-AK10 RepID=U1YYQ8_9BACI
NADP oxidoreductase {ECO:0000313|EMBL:KGM03658.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
F420-dependent methylene-tetrahydromethanopterin reductase
PLM3_30_b2_sep16_scaffold_422_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5281..6639)
DNA (1359bp) protein (453aa)
GTPase HflX Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SGZ3_ACTS5
hflX; GTP-binding protein HflX
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_10
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(6650..7804)
DNA (1155bp) protein (385aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S304_THEOJ
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_30_b2_sep16_scaffold_422_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7801..8667)
DNA (867bp) protein (289aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S303_THEOJ
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(8660..9625)
DNA (966bp) protein (322aa)
tRNA dimethylallyltransferase Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V0S1_9ACTO
tRNA delta(2)-isopentenylpyrophosphate transferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9625..11091)
DNA (1467bp) protein (489aa)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6ZEP0_SEGRD
MiaB family RNA modification protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(11113..12645)
DNA (1533bp) protein (511aa)
RNA binding metal dependent phosphohydrolase (EC:3.1.4.16)
Ribonuclease Y Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y823_THEBD
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_422_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(12917..13408)
DNA (492bp) protein (164aa)
Regulatory protein RecX Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJ40_SANKS
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying 15 items

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