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PLM3_30_b2_sep16_scaffold_442

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_442_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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1..444
DNA (444bp) protein (148aa)
UPF0301 protein Cwoe_0090 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F443_CONWI
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_442_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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508..1314
DNA (807bp) protein (269aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00037ECDFB
glycine cleavage system T protein (aminomethyltransferase)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_442_3
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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1359..1535
DNA (177bp) protein (59aa)
Glycine cleavage system T protein (aminomethyltransferase)
Glycine cleavage T protein (Aminomethyl transferase) bin=GWC2_Chloroflexi_73_18 species=Roseobacter sp. AzwK-3b genus=Roseobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Glycine cleavage system T protein (Aminomethyltransferase) {ECO:0000313|EMBL:AHY45912.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_30_b2_sep16_scaffold_442_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1547..2332
DNA (786bp) protein (262aa)
Methyltransferase type 11 Tax=Calothrix sp. PCC 7507 RepID=K9PD01_9CYAN
type 11 methyltransferase
Tax=RBG_16_Euryarchaeota_68_12_curated
PLM3_30_b2_sep16_scaffold_442_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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2426..3352
DNA (927bp) protein (309aa)
branched chain amino acid aminotransferase/branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase (EC:2.6.1.42 2.6.1.-)
branched-chain amino acid aminotransferase Tax=Frankia sp. BMG5.12 RepID=UPI000377E743
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_442_6
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

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3357..5951
DNA (2595bp) protein (865aa)
putative aminopeptidase (EC:3.4.11.-)
Putative aminopeptidase {ECO:0000313|EMBL:BAN01424.1}; EC=3.4.11.- {ECO:0000313|EMBL:BAN01424.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative aminopeptidase Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZYQ2_9ACTN
PLM3_30_b2_sep16_scaffold_442_7
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6116..7507
DNA (1392bp) protein (464aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase {ECO:0000313|EMBL:ACZ90184.1}; EC=1.2.1.8 {ECO:0000313|EMBL:ACZ90184.1};; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
Betaine-aldehyde dehydrogenase Tax=Actinomadura madurae LIID-AJ290 RepID=U2N546_9ACTO
PLM3_30_b2_sep16_scaffold_442_8
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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7511..8395
DNA (885bp) protein (295aa)
catecholic dioxygenase Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288EE6F
extradiol ring-cleavage dioxygenase III subunit B
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B {ECO:0000313|EMBL:ABK52873.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM3_30_b2_sep16_scaffold_442_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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8441..9922
DNA (1482bp) protein (494aa)
Amino acid permease Tax=Modestobacter marinus (strain BC501) RepID=I4EVX0_MODMB
amino acid permease
Amino acid permease {ECO:0000313|EMBL:CCH87533.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
PLM3_30_b2_sep16_scaffold_442_10
Streptomyces afghaniensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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10029..10883
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=Streptomyces afghaniensis 772 RepID=S4NI83_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPJ38144.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces afghaniensis 772.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_442_11
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10885..11265)
DNA (381bp) protein (127aa)
cupin Tax=Serinicoccus marinus RepID=UPI0003B598D8
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KGN31821.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
cupin
PLM3_30_b2_sep16_scaffold_442_12
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11279..12625)
DNA (1347bp) protein (449aa)
glutamate--ammonia ligase (EC:6.3.1.2)
Glutamate--ammonia ligase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7S6_CONWI
Glutamine synthetase catalytic domain protein {ECO:0000313|EMBL:CDO23630.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
PLM3_30_b2_sep16_scaffold_442_13
Rhodococcus erythropolis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(12622..13392)
DNA (771bp) protein (257aa)
3-oxoacyl-ACP reductase Tax=Rhodococcus erythropolis DN1 RepID=T5I700_RHOER
short-chain dehydrogenase
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EQM33524.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus erythropolis DN1.;"
PLM3_30_b2_sep16_scaffold_442_14
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13389..14105)
DNA (717bp) protein (239aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000360DB87
moae3; Protein moaE
Protein moaE {ECO:0000313|EMBL:CDF83793.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
Displaying 14 items

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