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PLM3_30_b2_sep16_scaffold_458

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_458_1
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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2..337
DNA (336bp) protein (112aa)
Activator of HSP90 ATPase 1 family protein Tax=Saccharopolyspora erythraea RepID=A4FLN2_SACEN
activator of HSP90 ATPase 1 family protein
Tax=RBG_13_Chloroflexi_60_13_curated
PLM3_30_b2_sep16_scaffold_458_2
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

464..1861
DNA (1398bp) protein (466aa)
3'' terminal RNA ribose 2''-O-methyltransferase Hen1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNF7_9CYAN
Methyltransferase type 12 {ECO:0000313|EMBL:KIF12514.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
3'' terminal RNA ribose 2''-O-methyltransferase Hen1
PLM3_30_b2_sep16_scaffold_458_3
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1864..4401
DNA (2538bp) protein (846aa)
Metallophosphoesterase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8C7J2_MYXFH
Metallophosphoesterase {ECO:0000313|EMBL:AEI64392.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
metallophosphoesterase
PLM3_30_b2_sep16_scaffold_458_4
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4586..5110
DNA (525bp) protein (175aa)
Phosphorinothyrcin n-acetyltransferase Tax=Streptomyces sp. C RepID=D9VYS3_9ACTO
Phosphorinothyrcin n-acetyltransferase {ECO:0000313|EMBL:EFL17601.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
N-acetyltransferase
PLM3_30_b2_sep16_scaffold_458_5
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5123..5899
DNA (777bp) protein (259aa)
Uncharacterized protein Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1BY63_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ29906.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
PLM3_30_b2_sep16_scaffold_458_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


5958..8402
DNA (2445bp) protein (815aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=SYL_ACIC1
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_7
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

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8497..9924
DNA (1428bp) protein (476aa)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
osmosensitive K+ channel signal transduction histidine kinase
Tax=RBG_13_Chloroflexi_68_17_curated
PLM3_30_b2_sep16_scaffold_458_8
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

9962..10585
DNA (624bp) protein (208aa)
hypothetical protein Tax=Demetria terragena RepID=UPI00037091C7
competence protein ComEA helix-hairpin-helix repeat-containing protein
Tax=BJP_IG2158_Actinobacteria_57_21
PLM3_30_b2_sep16_scaffold_458_9
Frankia sp. BMG5.23, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10582..13434
DNA (2853bp) protein (951aa)
ComEC/Rec2-related protein Tax=Frankia sp. (strain CcI3) RepID=Q2JDK6_FRASC
Putative hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:KDA43508.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. BMG5.23.;"
ComEC/Rec2-like protein
PLM3_30_b2_sep16_scaffold_458_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists


comp(13860..14132)
DNA (273bp) protein (91aa)
30S ribosomal protein S20 Tax=Streptomyces sp. W007 RepID=H0BA96_9ACTO
30S ribosomal protein S20
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_11
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

14226..16043
DNA (1818bp) protein (606aa)
Elongation factor 4 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MPS4_SACVD
GTP-binding protein LepA
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_12
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

16040..17116
DNA (1077bp) protein (359aa)
coproporphyrinogen III oxidase, anaerobic (EC:1.3.99.22)
Putative coproporphyrinogen dehydrogenase Tax=Propionibacterium acidifaciens F0233 RepID=U2QBZ6_9ACTO
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_13
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16957..18723)
DNA (1767bp) protein (589aa)
tolB protein Tax=Gemmata obscuriglobus RepID=UPI00016C4967
WD40 domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_30_b2_sep16_scaffold_458_14
BJP_IG2157_Actinomycetales_63_19, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(18710..19240)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00035CA5DC
ECF subfamily RNA polymerase sigma-24 subunit
Tax=BJP_IG2157_Actinomycetales_63_19
PLM3_30_b2_sep16_scaffold_458_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

19347..20369
DNA (1023bp) protein (341aa)
Heat-inducible transcription repressor hrcA Tax=Nocardioidaceae bacterium Broad-1 RepID=E9V2U1_9ACTO
hrcA; heat-inducible transcription repressor HrcA
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_16
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20376..21485
DNA (1110bp) protein (370aa)
molecular chaperone DnaJ Tax=Frankia sp. Iso899 RepID=UPI0003B457B0
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
PLM3_30_b2_sep16_scaffold_458_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

21482..21829
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JWW5_SACES
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22012..22938
DNA (927bp) protein (309aa)
PhoH family protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A9V0_THECD
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:ACY98786.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM3_30_b2_sep16_scaffold_458_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

22919..23371
DNA (453bp) protein (151aa)
metalloprotease (EC:3.4.24.-)
Endoribonuclease YbeY Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMG6_MICPN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

23368..24654
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y9U7_SORCE
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_21
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

24651..25061
DNA (411bp) protein (137aa)
Cytidine deaminase Tax=Azospirillum brasilense Sp245 RepID=G8AKI0_AZOBR
cytidine deaminase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_22
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

25058..25954
DNA (897bp) protein (299aa)
GTPase Era Tax=Mycobacterium canettii CIPT 140070008 RepID=L0Q903_9MYCO
GTPase Era
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_458_23
unknown

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comp(25959..26369)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_458_24
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26570..26926
DNA (357bp) protein (119aa)
glyoxalase Tax=Actinopolymorpha alba RepID=UPI0003750952
Glyoxalase {ECO:0000313|EMBL:KJY39889.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_458_25
R_OP11_Roizmanbacteria_39_12c, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

26959..27447
DNA (489bp) protein (163aa)
Uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_12c_curated
PLM3_30_b2_sep16_scaffold_458_26
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27628..28053
DNA (426bp) protein (142aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
Deoxyribose-phosphate aldolase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q7V0_STANL
Displaying 26 items

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