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PLM3_30_b2_sep16_scaffold_158_13

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 13756..14280

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 type 2 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHY3_NOCSJ similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 158.0
  • Bit_score: 108
  • Evalue 4.40e-21
sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 158.0
  • Bit_score: 108
  • Evalue 1.20e-21
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.9
  • Coverage: 162.0
  • Bit_score: 142
  • Evalue 3.00e-31

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGAGCCAGGACACCGGTATCGTCCGCCCCATCGTGGCGGATCGGACCGACCTCGAGGATCTCTACGTGCGGCACATCCCGGGCGCCGTCCGGGTCGCCGCCCTGATCACGGGCGACGCCGACCTGGCCCAGGACATCGCGCAGGACGCCTTCCTGCGCTCGGTGGGCCGCTTCCGGCACCTTCGGCAGCCCGAGGCGTTCGAGGCCTACCTGCGCCGCGCGGTCGCGAACGCCTGCACATCGCACTTCCGCCGCCGCAAGGTCGAGGCGGCCTACCTGCACGGCCAGGCTCGGGGTACGGCGTCGGTCGACGAGCCGAACCACGGCCGGCGCGACGAGCTCCGAACGGCGCTCTCTGCCCTGCCGGCGCGTCAGCGGGCCGCCGTGGTGCTCCGCTACTACGCCGACCTATCCGAGCAGCAGGCCGGCGAGGCGCTCGGCTGCTCCGCGGCCGCCGTGCGGTCGATGGTCGCCCGCGCGATGGAGGCGCTTCGCCAACGGATCCCGAGGAGTGAGGACACGTGA
PROTEIN sequence
Length: 175
MSQDTGIVRPIVADRTDLEDLYVRHIPGAVRVAALITGDADLAQDIAQDAFLRSVGRFRHLRQPEAFEAYLRRAVANACTSHFRRRKVEAAYLHGQARGTASVDEPNHGRRDELRTALSALPARQRAAVVLRYYADLSEQQAGEALGCSAAAVRSMVARAMEALRQRIPRSEDT*