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PLM3_30_b2_sep16_scaffold_158

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_158_1
unknown

Not on your lists

350..757
DNA (408bp) protein (136aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_158_2
unknown

Not on your lists

916..1194
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_158_3
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2095..2571)
DNA (477bp) protein (159aa)
hypothetical protein Tax=Nocardiopsis synnemataformans RepID=UPI00034A73BD
Deaminase-reductase domain-containing protein {ECO:0000313|EMBL:EON25473.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
bifunctional deaminase-reductase domain-containing protein
PLM3_30_b2_sep16_scaffold_158_4
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

2977..4557
DNA (1581bp) protein (527aa)
id=14631018 bin=bin9_gal15 tax=bin9_gal15 organism_group=GAL15
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_30_b2_sep16_scaffold_158_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(4642..4887)
DNA (246bp) protein (82aa)
Septum formation initiator Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MYV7_SACVD
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_158_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(5012..6292)
DNA (1281bp) protein (427aa)
eno; phosphopyruvate hydratase (EC:4.2.1.11)
enolase Tax=Actinokineospora enzanensis RepID=UPI00035E4A71
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_158_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

6364..7023
DNA (660bp) protein (220aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Xylanimonas cellulosilytica genus=Xylanimonas taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
type 12 methyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_158_8
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(7066..7878)
DNA (813bp) protein (271aa)
MazG family protein Tax=Chthonomonas calidirosea T49 RepID=S0EU62_9BACT
MazG family protein
Tax=RBG_13_Actinobacteria_55_18_curated
PLM3_30_b2_sep16_scaffold_158_9
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(7875..8915)
DNA (1041bp) protein (347aa)
Uncharacterized protein Tax=Modestobacter marinus (strain BC501) RepID=I4ESQ9_MODMB
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_158_10
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8912..12256)
DNA (3345bp) protein (1115aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
transcription-repair coupling factor Tax=Frankia sp. BCU110501 RepID=UPI00036AE8B3
transcription-repair coupling factor
PLM3_30_b2_sep16_scaffold_158_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12369..12953)
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GFD6_PROFC
PLM3_30_b2_sep16_scaffold_158_12
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists


comp(12968..13663)
DNA (696bp) protein (232aa)
50S ribosomal protein L25 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJD0_9FIRM
50S ribosomal protein L25
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_30_b2_sep16_scaffold_158_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13756..14280
DNA (525bp) protein (175aa)
Sigma-70, region 4 type 2 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHY3_NOCSJ
sigma-70 factor
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_158_14
unknown

Not on your lists

14277..15797
DNA (1521bp) protein (507aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_158_15
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

15866..16420
DNA (555bp) protein (185aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000382270A
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_158_16
unknown

Not on your lists

16417..18420
DNA (2004bp) protein (668aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_158_17
CG_Solirubrobact_01, Rubrobacteridae, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18421..19443)
DNA (1023bp) protein (341aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M0L1_ACIFD
Tax=CG_Solirubrobact_01
Displaying 17 items

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