ggKbase home page

PLM3_30_b2_sep16_scaffold_758_15

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: 10445..12004

Top 3 Functional Annotations

Value Algorithm Source
delta-1-piperideine-6-carboxylate dehydrogenase (EC:1.2.1.-) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 515.0
  • Bit_score: 776
  • Evalue 3.20e-222
Delta-1-piperideine-6-carboxylate dehydrogenase {ECO:0000313|EMBL:ABG05835.1}; EC=1.2.1.- {ECO:0000313|EMBL:ABG05835.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 515.0
  • Bit_score: 776
  • Evalue 1.60e-221
Delta-1-piperideine-6-carboxylate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ3_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 515.0
  • Bit_score: 776
  • Evalue 1.10e-221

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1560
ATGGCGCGGACCGTCTCCTCCTTGATCGCCGGCCAAGCGCGCGAGGACGCGCCGGGCGGCACCCAGGACATCCCGAACCCGGCCAGGCTCGACGAGATCGTCGCGACCGTCGGGCTGGCCGACGCCACGACCTTCGTCGAGGCCTGCGCCGCAGCTCGGAAGGCGCAGCGCGACTGGGCGCGCGTGCCGGCGCCCGTGCGTGGGCGCGCGATCCAACAGCTCGGGCGGCTCGTCGAGGACAACGCCGAGATGCTCGCCCGGATCATGACCCGCGAGATCGGCAAGCCGATCGCCGAGGCCCGGGGGTCGGTCCAGGAGGTCGTCGACACGTGCAACTTCTTCGTGTCGGAGGGCCGGCGTCTCTACGGGATGACCGTGCCCTCCGAGCTCCCCGACAAGCAGCTGTTCACGTTCCGCAACCCGGTCGGCGTGGCCGCGATCGTGACGGCGGGGAACTTCCCGGTCGCGGTCCCTTCGTGGTACCTGGTCCCGGCGCTCCTGTGTGGGAACGCGGCGGTCTGGAAGCCCGCCGAGTACGCGCCCGCCACCTCCGAGGCGCTCGCCCAGCTGTTCCTGCACGCCGGCTTCCCCGGGGGCGTGTTCAACGTGGTGCTCGCGGATGGCGCCGCGACGTTCGAGGGGCTGTCGCAGGCCCTCGACGCCGGGTTCGTCGACAAAGTCGGGTTCACGGGCTCGAGCGAGGTGGGGCGGCGGCTCGGCGAGCTCTGCGGCCGGCACCTCCAGACGCCCTGTCTCGAGCTCGGCGGGAAGAACCCGCTCGTCGTGATGCCCGACGCCGACCTCGATCTCGCGGTCGAGGGCGCGCTGTTCAGCGGGTTCGGGACGGCGGGGCAGCGGTGCACCTCGCTCGGGACGGTGATCGTGCACGAGCAGGTGCACGACGACTTTCTCGCACGGTACGCCGAGGCGGTCGAGACGGCGTCGATCGGCGATCCGTTCGAGGACGTGCTCTACGGGCCGATGATCTCCTCGCGCTTCTACGAGCGGTTCCTCGGATGGCTCGACTGGGTGCAGCCGCACCACGCGCTCCGCGGTTCGACCGCGACCGGAAGGATCACGCGGGACGCTCCCCGCGCCGGGTTCGTCGGCGATCCTGAGGCCGGCCTGTTCGTGCACCCGACGATCGTGGACGGCGTCACGATGGACGACGACCTGTACAAGCAGGAGACGTTCGGCCCGATCGTGGGCGTGTCGTCGTTCGGTGACTTCGACGAGGCGATCACGCTCGCCAACGGCCACGGCTACGGCCTGTCGGCCTCGATCTACACGACGGACCCGCTCAACGTGTTCCGGTTCCGCGAGCGCATCTCGGCGGGCATGGTGAGCGTGAACAACTCGACCACCGGCGCCGAGGCCCACCTGCCGTTCGGCGGCAACGGACGGAGCGGCAACGGTGCGCGGCAGTCCGGGGTGTGGGTGCTCGACCAGTTCACGCGCTGGCAGGCGATGAACTGGGACTACTCGGGTCGGCTGCAGAAGGCGCAGATGGACGTCGCCGACGTGTCGGCGGACCCGTCGTTCCGGCTAACCGAGTCATGA
PROTEIN sequence
Length: 520
MARTVSSLIAGQAREDAPGGTQDIPNPARLDEIVATVGLADATTFVEACAAARKAQRDWARVPAPVRGRAIQQLGRLVEDNAEMLARIMTREIGKPIAEARGSVQEVVDTCNFFVSEGRRLYGMTVPSELPDKQLFTFRNPVGVAAIVTAGNFPVAVPSWYLVPALLCGNAAVWKPAEYAPATSEALAQLFLHAGFPGGVFNVVLADGAATFEGLSQALDAGFVDKVGFTGSSEVGRRLGELCGRHLQTPCLELGGKNPLVVMPDADLDLAVEGALFSGFGTAGQRCTSLGTVIVHEQVHDDFLARYAEAVETASIGDPFEDVLYGPMISSRFYERFLGWLDWVQPHHALRGSTATGRITRDAPRAGFVGDPEAGLFVHPTIVDGVTMDDDLYKQETFGPIVGVSSFGDFDEAITLANGHGYGLSASIYTTDPLNVFRFRERISAGMVSVNNSTTGAEAHLPFGGNGRSGNGARQSGVWVLDQFTRWQAMNWDYSGRLQKAQMDVADVSADPSFRLTES*