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PLM3_30_b2_sep16_scaffold_758

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_758_1

Not on your lists

2..229
DNA (228bp) protein (76aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036862E2
Marine sediment metagenome DNA, contig: S01H4_S07174 {ECO:0000313|EMBL:GAG94727.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_30_b2_sep16_scaffold_758_2
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

226..1638
DNA (1413bp) protein (471aa)
aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
hypothetical protein Tax=Patulibacter americanus RepID=UPI0003B31AC0
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1892..2164
DNA (273bp) protein (91aa)
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Thermus thermophilus RepID=H9ZSY0_THETH
phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_4
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2244..3149
DNA (906bp) protein (302aa)
hypothetical protein Tax=Sporichthya polymorpha RepID=UPI000371555C
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
putative DNA end-binding protein Ku
PLM3_30_b2_sep16_scaffold_758_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(3157..3864)
DNA (708bp) protein (236aa)
Uncharacterized protein bin=GWC2_Chloroflexi_73_18 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Pirin domain-containing protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_6
unknown

Not on your lists

4053..4298
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4700..5689
DNA (990bp) protein (330aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00036551CD
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_8
GWC2_OP11_39_8_plus, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(5815..6423)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LS50_ACIC1
Uncharacterized protein {ECO:0000313|EMBL:KKR33154.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWC2_39_8.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_758_trna_2
unknown

Not on your lists

comp(6558..6632)
DNA (75bp)
transferRNA Arg
PLM3_30_b2_sep16_scaffold_758_9
unknown

Not on your lists

6727..6867
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6960..7727)
DNA (768bp) protein (256aa)
Conserved TM helix repeat-containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XLV3_9BACT
Conserved TM helix repeat-containing protein {ECO:0000313|EMBL:EEF59210.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
TM helix repeat-containing protein
PLM3_30_b2_sep16_scaffold_758_11
unknown

Not on your lists

8446..8775
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_12
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8906..9337
DNA (432bp) protein (144aa)
hypothetical protein Tax=Methylocystis rosea RepID=UPI00037A30C8
Globin {ECO:0000313|EMBL:EHH12327.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
PLM3_30_b2_sep16_scaffold_758_13
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9541..9921
DNA (381bp) protein (127aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003702552
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(9927..10367)
DNA (441bp) protein (147aa)
hypothetical protein bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
Crp/Fnr family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10445..12004
DNA (1560bp) protein (520aa)
delta-1-piperideine-6-carboxylate dehydrogenase (EC:1.2.1.-)
Delta-1-piperideine-6-carboxylate dehydrogenase {ECO:0000313|EMBL:ABG05835.1}; EC=1.2.1.- {ECO:0000313|EMBL:ABG05835.1};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Delta-1-piperideine-6-carboxylate dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARZ3_RUBXD
PLM3_30_b2_sep16_scaffold_758_16
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

12001..13230
DNA (1230bp) protein (410aa)
Metallo-dependent hydrolase (EC:3.1.8.1)
Parathion hydrolase Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=B8H3F3_CAUCN
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_17
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

13357..13857
DNA (501bp) protein (167aa)
dihydrolipoamide acyltransferase Tax=Streptomyces sp. CNB091 RepID=UPI00035DE320
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_18
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14098..14412)
DNA (315bp) protein (105aa)
Putative trypsin-like serine protease Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D2S0_DEIDV
trypsin-like serine protease
Tax=RBG_16_RIF_CHLX_70_13_curated
PLM3_30_b2_sep16_scaffold_758_19
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14384..14890)
DNA (507bp) protein (169aa)
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_30_b2_sep16_scaffold_758_20
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15114..15344)
DNA (231bp) protein (77aa)
UPI0003D6470E related cluster Tax=unknown RepID=UPI0003D6470E
surface adhesion protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_30_b2_sep16_scaffold_758_21
unknown

Not on your lists

comp(15348..15476)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_22
unknown

Not on your lists

comp(15625..15792)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_23
unknown

Not on your lists

comp(16052..16366)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_24
unknown

Not on your lists

comp(16431..16544)
DNA (114bp) protein (38aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_25
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(16528..16767)
DNA (240bp) protein (80aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_758_26
unknown

Not on your lists

17239..17484
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_27
unknown

Not on your lists

17787..18092
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_28
unknown

Not on your lists

18641..18829
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_758_29
unknown

Not on your lists

comp(18962..19168)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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