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PLM3_30_b2_sep16_scaffold_114_21

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(19472..20629)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit Tax=Streptomyces auratus AGR0001 RepID=J1RHB0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 385.0
  • Bit_score: 584
  • Evalue 6.10e-164
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EJJ03729.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 385.0
  • Bit_score: 584
  • Evalue 8.50e-164
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 382.0
  • Bit_score: 568
  • Evalue 1.30e-159

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Taxonomy

Streptomyces auratus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
GTGCTCGTCCGTATCTTCGGCGACATCGACGTCGCCGAGGAGGCCGTCCAGGACGCGTTCGCCGTGGCCGTGGACCGGTGGCCGTCGACCGGCCCGCCTCCGAGCCCCGCGGGGTGGATCATCACGACGGCCCGCAACCGCGCGATCGATCGCCTCCGCCGTGAGGCCTCTCGCGACGACCGGCACGCCCAGGCGGCGCTCCTGCACGAGCGAGGCGAGCCGCTCGAGGAGGGCGCGGTGCGCGACGACCAGCTGCGCCTGATCTTCACGTGCTGTCATCCGTCGCTCGCGACCGGTTCGCAGGTCGCGCTCACGCTCCGACTGCTGGGCGGGCTCACGACTGCCGAGATCGCCAGGGCGTTCCTCGTGCCAGAGCCGACGATGGCACAGCGCCTGGTCCGGGCCAAGGCGAAGATCCGCGACGCCGGCATCCCCTACCGCGTCCCGTTCGAGGCCGACCTACCGGATCGCCTGAACGCCGCGCTCGCCGTCGTCTACCTGATCTTCAACGAGGGCTACGCGGCCAGCTCGGGCGAGCGCCTCGTCCGTGAGGACCTGTGTTCGGAGGCCATCCGCCTCGGGCGCCTCCTGGCCGTGCTCATGCCGGACGAGCCCGAGGTCATGGGCCTGCTCGCGCTCATGCTCCTCACCGAGTCGCGACGCCGGACGCGGACGACGGCCGAGGGCGACCTCGTGCTGCTTGCCGACCAGGACCGTGCTCGGTGGGACCGCGACCTGATCGCGGAGGGTCAGGCGCTCGTCCGCGCCTGTTTGCGTCGGAACCGACCTGGTCCGTATCAGATCCAGGCGGCGATCAACGCCGTCCACGGCGACGCCCCGAGCGCCGACGCCACCGACTGGCGCCAGATCCTGCGGCTGTACGACCAGCTGGTGGCGCTCGAGCCGAGCCCGGTCGCGGCGCTCAACCGATCGGTCGCGGTCGCCGAGGTCGACGGGGCGGCGGCCGCGCTCGAGATCGTCGACGGGCTGGACCTGGACCGCTACTACCTGTTCCACGCCATCCGGGCCGACCTACTCTCCCGGCTGGGCCGAGGCCCCGAGGCCCACAAGGCATACGGCCGGGCGATCCGAGCGACCACGAACGAGCCCGAGCGCACCCTCCTCGAGCGCAAACGCACGGCCCTCCGCATACCATGA
PROTEIN sequence
Length: 386
VLVRIFGDIDVAEEAVQDAFAVAVDRWPSTGPPPSPAGWIITTARNRAIDRLRREASRDDRHAQAALLHERGEPLEEGAVRDDQLRLIFTCCHPSLATGSQVALTLRLLGGLTTAEIARAFLVPEPTMAQRLVRAKAKIRDAGIPYRVPFEADLPDRLNAALAVVYLIFNEGYAASSGERLVREDLCSEAIRLGRLLAVLMPDEPEVMGLLALMLLTESRRRTRTTAEGDLVLLADQDRARWDRDLIAEGQALVRACLRRNRPGPYQIQAAINAVHGDAPSADATDWRQILRLYDQLVALEPSPVAALNRSVAVAEVDGAAAALEIVDGLDLDRYYLFHAIRADLLSRLGRGPEAHKAYGRAIRATTNEPERTLLERKRTALRIP*