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PLM3_30_b2_sep16_scaffold_114

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_30_b2_sep16_scaffold_114_1
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..713)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RDW2_FRAAA
multidrug resistance efflux protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ64354.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM3_30_b2_sep16_scaffold_114_2
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

887..2122
DNA (1236bp) protein (412aa)
Conserved repeat domain Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NN95_ROSCS
hypothetical protein
Conserved repeat domain {ECO:0000313|EMBL:ABU59028.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM3_30_b2_sep16_scaffold_114_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

2189..3967
DNA (1779bp) protein (593aa)
HAD-superfamily subfamily IB hydrolase, TIGR01490 Tax=Frankia sp. (strain EAN1pec) RepID=A8L880_FRASN
HAD family hydrolase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_4
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

3964..4338
DNA (375bp) protein (125aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037268F6
fatty acyl CoA reductase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_5
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

4710..5489
DNA (780bp) protein (260aa)
zinc-binding alcohol dehydrogenase Tax=Kribbella catacumbae RepID=UPI0003792DE2
alcohol dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_6
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5512..7098
DNA (1587bp) protein (529aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036737D9
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_7
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

7098..8003
DNA (906bp) protein (302aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI000375711B
phospholipid/glycerol acyltransferase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

8008..8613
DNA (606bp) protein (202aa)
Putative TetR family transcriptional regulator Tax=Ilumatobacter coccineus YM16-304 RepID=M5A2C3_9ACTN
putative TetR family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_9
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9044..9652
DNA (609bp) protein (203aa)
hypothetical protein Tax=Streptomyces sp. SS RepID=UPI00036C6F39
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL79543.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3_30_b2_sep16_scaffold_114_10
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9735..10673
DNA (939bp) protein (313aa)
hypothetical protein Tax=Streptomyces sp. SS RepID=UPI0002E344D5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF69337.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
PLM3_30_b2_sep16_scaffold_114_11
unknown

Not on your lists

10746..11183
DNA (438bp) protein (146aa)

This feature has no annotations

PLM3_30_b2_sep16_scaffold_114_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11106..11588)
DNA (483bp) protein (161aa)
Adenylyl cyclase Tax=Modestobacter marinus (strain BC501) RepID=I4EV18_MODMB
adenylyl cyclase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3_30_b2_sep16_scaffold_114_13
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11967..13340
DNA (1374bp) protein (458aa)
nuoF; NADH-quinone oxidoreductase subunit F (EC:1.6.99.5)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000365F978
Uncharacterized protein {ECO:0000313|EMBL:ETX07162.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_30_b2_sep16_scaffold_114_14
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13431..14786)
DNA (1356bp) protein (452aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00036CEB96
Protein kinase {ECO:0000313|EMBL:KGN42812.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
PASTA sensor-containing serine/threonine protein kinase
PLM3_30_b2_sep16_scaffold_114_15
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(14865..15746)
DNA (882bp) protein (294aa)
hypothetical protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Fis family transcriptional regulator
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3_30_b2_sep16_scaffold_114_16
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16276..16971)
DNA (696bp) protein (232aa)
Transcriptional regulator, TetR family Tax=Streptomyces ipomoeae 91-03 RepID=L1KZG7_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKX65934.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
TetR family transcriptional regulator
PLM3_30_b2_sep16_scaffold_114_17
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

17095..18069
DNA (975bp) protein (325aa)
Alcohol dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AY90_STRRD
NADPH:quinone reductase and related Zn-dependent oxidoreductase
NADPH:quinone reductase and related Zn-dependent oxidoreductase {ECO:0000313|EMBL:AHY45646.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM3_30_b2_sep16_scaffold_114_18
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18091..18519
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZS4_METPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI61946.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
PLM3_30_b2_sep16_scaffold_114_19
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18544..19104
DNA (561bp) protein (187aa)
Uncharacterized protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKU7_ANASK
Uncharacterized protein {ECO:0000313|EMBL:GAO01206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_114_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(19088..19462)
DNA (375bp) protein (125aa)
hypothetical protein bin=bin8_Chloro species=Methanomethylovorans hollandica genus=Methanomethylovorans taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_21
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19472..20629)
DNA (1158bp) protein (386aa)
ECF subfamily RNA polymerase sigma-24 subunit Tax=Streptomyces auratus AGR0001 RepID=J1RHB0_9ACTO
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:EJJ03729.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
RNA polymerase subunit sigma-24
PLM3_30_b2_sep16_scaffold_114_22
Rhodococcus ruber, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20704..21057)
DNA (354bp) protein (118aa)
DGPFAETKE family protein Tax=Amycolatopsis methanolica RepID=UPI00036D9989
Uncharacterized protein {ECO:0000313|EMBL:CDZ88234.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus ruber.;"
DGPFAETKE family protein
PLM3_30_b2_sep16_scaffold_114_23
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21084..21680)
DNA (597bp) protein (199aa)
Riboflavin biosynthesis protein RibD C-terminal domain protein Tax=Rhodococcus erythropolis SK121 RepID=C3JS38_RHOER
Uncharacterized protein {ECO:0000313|EMBL:KJF21883.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
hypothetical protein
PLM3_30_b2_sep16_scaffold_114_24
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21893..22468)
DNA (576bp) protein (192aa)
30S ribosomal protein S4 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3Q5_9FIRM
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
30S ribosomal protein S4
PLM3_30_b2_sep16_scaffold_114_25
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22623..23537
DNA (915bp) protein (305aa)
Probable ADP-ribosylglycohydrolase {ECO:0000313|EMBL:CAI50030.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAI50030.1};; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) (Halobacterium; pharaonis).;"
Probable ADP-ribosylglycohydrolase Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC1_NATPD
ADP-ribosylglycohydrolase
PLM3_30_b2_sep16_scaffold_114_26
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(23701..24717)
DNA (1017bp) protein (339aa)
6-phosphogluconate dehydrogenase, decarboxylating Tax=Frankia sp. (strain EuI1c) RepID=E3J2C2_FRASU
6-phosphogluconate dehydrogenase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_30_b2_sep16_scaffold_114_27
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(24717..26084)
DNA (1368bp) protein (456aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003785EA7
transaldolase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_30_b2_sep16_scaffold_114_28
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(26162..26842)
DNA (681bp) protein (227aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
hypothetical protein Tax=Rubritalea marina RepID=UPI00036F388E
Tax=RBG_16_Actinobacteria_68_21_curated
PLM3_30_b2_sep16_scaffold_114_29
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

26956..28173
DNA (1218bp) protein (406aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZ08_9CHLR
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=CG_Anaero_03
PLM3_30_b2_sep16_scaffold_114_30
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

28208..28441
DNA (234bp) protein (78aa)
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
Displaying items 1-30 of 43 in total

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