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PLM3_30_b2_sep16_scaffold_114_32

Organism: PLM3_30_b2_sep16_Actinobacteria_70_20

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 15 / 38 MC: 1
Location: comp(28668..29339)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma24 factor Tax=Frankia sp. BMG5.12 RepID=UPI0003704004 similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 213.0
  • Bit_score: 215
  • Evalue 3.30e-53
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 212.0
  • Bit_score: 210
  • Evalue 3.00e-52
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 72.0
  • Coverage: 211.0
  • Bit_score: 297
  • Evalue 9.20e-78

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGAGCGACACACGCTCCCGAGCCGCGACCCAACAGGATCTCGCGCTCGCCGAGGCGCTCCGGGCCGGAGACGAGACCGCCTTCATGATGCTGGTCGAGCGCTACCAGCCCGCGATGCTGCGCATCGCCCTCATGTACGTGTCGACGCGGGCGGTGGCCGAGGACGTCGTCCAGGATGCCTGGGTCGGCGTGCTGAAGGGGCTCGACGGCTTCGAGGGTCGCTCGTCGCTTCGGACGTGGATCTTCCGGATCCTCGTGAACACGGCGAAGACGCGGGGACAGCGCGAGGCCCGGAGCGTCCCCTTCTCCTCGGTCTGGGCGGCCGACCCGGAGGTCGAGCCGTCGGTGGACCCCGACCGGTTCCTGCCGCTCGGCCACCCAGGCTCGCCGGGCCGCTGGGCGGAGCCACCGCTCGGGTGGGCGTCGACGCCGGAGGAGCGGCTGCTGTCCAAGGAGACGCTCGCGGAGGTCTCGCGCGCGATCGACGCGCTGCCGCCGAACCAGCGCGAGGTGATCAAGATGCGCGACGTCCTGGGGTGGACCTCGGCGGACGTCCGTAACGCCCTCGACATCTCCGAGACCAATCAGCGGGTGCTCTTGCATCGCGCACGCGCGAAGGTCCGGCGAGCGCTCGAGGGCTACCTCGGACCGGAGAGGGAGCGGACGTCGTGA
PROTEIN sequence
Length: 224
MSDTRSRAATQQDLALAEALRAGDETAFMMLVERYQPAMLRIALMYVSTRAVAEDVVQDAWVGVLKGLDGFEGRSSLRTWIFRILVNTAKTRGQREARSVPFSSVWAADPEVEPSVDPDRFLPLGHPGSPGRWAEPPLGWASTPEERLLSKETLAEVSRAIDALPPNQREVIKMRDVLGWTSADVRNALDISETNQRVLLHRARAKVRRALEGYLGPERERTS*