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PLM3-1_50_b2_sep16_scaffold_1222_2

Organism: PLM6_50_b2_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(2401..2925)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator RfaH bin=GWA2_OP3_52_12 species=gamma proteobacterium IMCC3088 genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 172.0
  • Bit_score: 240
  • Evalue 7.40e-61
putative RfaH family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 152.0
  • Bit_score: 101
  • Evalue 1.50e-19
Tax=GWD2_Deltaproteobacteria_55_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 174.0
  • Bit_score: 232
  • Evalue 3.70e-58

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Taxonomy

GWD2_Deltaproteobacteria_55_8_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCACGAGGAGTCGTTGCATATTGAACCCGGTCTTCGTTGGTATGCGATCCAGACGAAGGCCAACAAAGAAAAGGAAGTTGAAAAACGGCTTTCCGATCTCCGCATCGAAGTCTTTTTACCTTGGATGCGAACGCGGCGGAGAATTGGCAGCCGGTTTCACTGGGTTCTCGTTCCACTTTTTCCTGGTTATCTTTTTTGTCGGCTCGATCTCATAGAATCCGGAAAAGCAGCGCGCTACGCTCCGGGGGTTAGAGATTTTCTTAAATTCGGCAATCACATTGCCGAGGTTGGGGGCGAGATTGTCACGTCTTTGCGCGAGCGCTGCCCGGACGGCATAGCCCAAATAGAACTGGTTTCGGCGAAGCCGGGAGACGCGATCAAGATCAATGAGGGACCCTTTTCCGGTCTCGAGGCGATCTTCGAGAAAAAAATGAAGGGCAGCGAGCGCGTCGCAGTTTTACTAGAGATCTTGGGTCGCCAAACCCGCATAGTCCTACCAAGCGAAACTATCGAAAAGATCTAG
PROTEIN sequence
Length: 175
MHEESLHIEPGLRWYAIQTKANKEKEVEKRLSDLRIEVFLPWMRTRRRIGSRFHWVLVPLFPGYLFCRLDLIESGKAARYAPGVRDFLKFGNHIAEVGGEIVTSLRERCPDGIAQIELVSAKPGDAIKINEGPFSGLEAIFEKKMKGSERVAVLLEILGRQTRIVLPSETIEKI*