ggKbase home page

PLM3-1_50_b2_sep16_scaffold_1222_3

Organism: PLM6_50_b2_sep16_Deltaproteobacteria_54_7

near complete RP 41 / 55 MC: 1 BSCG 41 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 3427..5361

Top 3 Functional Annotations

Value Algorithm Source
PrkA AAA domain family bin=GWA2_OP3_52_12 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 644.0
  • Bit_score: 1169
  • Evalue 0.0
PrkA AAA domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 644.0
  • Bit_score: 1018
  • Evalue 4.60e-295
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 645.0
  • Bit_score: 1177
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_60_16 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1935
ATGGACCATAACAAGGAATTCGAGACAATTATCAAACAGGACCGAGACCTTCACCATGCTGGATCTTGGCGGGGCAATCTCCTGGGCTATCTGGAAAAGGTCAAGGAAGATCCCACCACGGCCAAATTAGCGCACGCCCGGCTTTACGACACGATCATGAAAGTTGGCATTAGAGACATCCACGAAAGCGGCGATCCCCACGTCAAGCGGCTGTACAAAGACGAATCCATCAAGGTCTACGATTTCTTTGCTGATGAATTCTTCGGGATCGAAAAAACCATCTCCCAGATCGTGCGCTACTTTCACGCGGCGTCACTCAAGGGCGAGGAAAGCCGGCAGGTGCTCTACCTGATGGGGCCGGTGGGTTCTGGAAAAAGCTCTTTGGTCGAGAAACTGCACAGGGGTTTAGAAGAAAGCGAGTCCATCTATGCCATCGAAGGCTGCCCAATGTTTGAAGAGCCGCTCCATCTGATACCCCGCCATCTAAGAAAAGAATTCGAGAAGATGCTGGGCGTTCATGTGGAGGGAGATCTGTGCCCGGTTTGCCGTTTTCGGCTGCGAGAAGAATTCGGCGGCAAGTATGAAGAGTTTCCGGTGTGCACGGTGGAGTTTTCCAAGCGATCGCGGATCGGCATCGGCGTCGTTCCGCCGGTGGATCCCAATAACCAGGACACTTCAGTCCTGATCGGCAGCGAGGACATTTCCAAGCTGGACCTTTACTCGGAAGGCGATCCGCGCGTCTTAGAGCTTAATGGGGCGTTAAATATCGGCAATCGCGGTATCGTGGAATTTATCGAGGTCTTCAAGAACGAGATCGAGTATCTGCACTGCATGATCACCGCGACCCAGGAAAAGGTGGTTCCCGCCCCGGGTCGGCATGGTCTCGTCTACGTTGACACTGTCATTGTCGCCCATTCCAACGAAGCGGAGTGGCAGAAGTTCAAGTCAGATCACACCAACGAGGCGATCCTCGATCGTATCGTCGTCGTCCGCATGGCGTACAACTTACGGCTATCCGAGGAAGTTAAGATATATCAGAAGATCATTCGTAATTCGGATTTCCGCGCCCACGTGGCGCCCCACACGCTGGAGATCGCCTCCATGTTCGCCATCCTGTCGCGCCTCGAGCCGACCAACAAGTGCGATCTCATGACCAAGTTAAAGCTTTACAACGGCGAAGAAGTCGTCGAGAAAGGACGAACCAAAAAGGTCGACGTCCAAGAGCTACGCGACGCTTCCAAGCGTGAAGGCATGAGCGGTATCTCGACGCGCTTCATTATGAAGGCCTTGGACAATGCGCTCTCGGATAACACAGCCGGTAACTGCATCAATCCGATAAACGTACGCGAGGCGTTGGTGAATATGGTCAAGGAAGCCGACCTATCGGATGATGCACGGAAGCAGTACCTGGAATTTCTCCAGGATACGCTACACAAGGAGTACCTCGAAATCCTCGAAAAGGAGATTACCCGCGCGTTCGTCTATTCGTACCAGGAACAGGCGGAGGTTCTATTCCAGAATTATCTCGACCATGCCGAAGCCTATGTGAACAAGGGCAAGGTCAAAGACCGAAACACGAAGGAAGAACTTAACCCGGACGAAGGTTTCATGAAATCCATCGAGGAACAAATCGCCATTATTGGCTCGGCGGCCGACGGCTTCCGTCAAGAAGTCATTGCCTACCTCTGGGCGGCCAACCGCAGGGGTGAGAAGATCGACTACCGGAGTTACGAGCCATTGAAAGAGGCTATCGAGAAAAAGCTCATCACGTCGGTCAGAGACTTGAGCCGGGTCATCACTAAGGCGAGGATGCGTGACGAGGAGCAATCGGAGAAATACAACACGATGGTGAAAAACCTTCTCGACCGCGGTTACTGCCATACCTGCGTCGATATGATTCTCAAGTATGCGGCGAATAATTTATGGAAAGACTAG
PROTEIN sequence
Length: 645
MDHNKEFETIIKQDRDLHHAGSWRGNLLGYLEKVKEDPTTAKLAHARLYDTIMKVGIRDIHESGDPHVKRLYKDESIKVYDFFADEFFGIEKTISQIVRYFHAASLKGEESRQVLYLMGPVGSGKSSLVEKLHRGLEESESIYAIEGCPMFEEPLHLIPRHLRKEFEKMLGVHVEGDLCPVCRFRLREEFGGKYEEFPVCTVEFSKRSRIGIGVVPPVDPNNQDTSVLIGSEDISKLDLYSEGDPRVLELNGALNIGNRGIVEFIEVFKNEIEYLHCMITATQEKVVPAPGRHGLVYVDTVIVAHSNEAEWQKFKSDHTNEAILDRIVVVRMAYNLRLSEEVKIYQKIIRNSDFRAHVAPHTLEIASMFAILSRLEPTNKCDLMTKLKLYNGEEVVEKGRTKKVDVQELRDASKREGMSGISTRFIMKALDNALSDNTAGNCINPINVREALVNMVKEADLSDDARKQYLEFLQDTLHKEYLEILEKEITRAFVYSYQEQAEVLFQNYLDHAEAYVNKGKVKDRNTKEELNPDEGFMKSIEEQIAIIGSAADGFRQEVIAYLWAANRRGEKIDYRSYEPLKEAIEKKLITSVRDLSRVITKARMRDEEQSEKYNTMVKNLLDRGYCHTCVDMILKYAANNLWKD*