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PLM3-1_50_b1_sep16_scaffold_1093

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1093_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..642
DNA (642bp) protein (214aa)
Putative cobyrinic acid a,c-diamide synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IK24_NITGG
cobyrinic acid a,c-diamide synthase
Putative cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:AFU60480.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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687..2132
DNA (1446bp) protein (482aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP44_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60479.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_3
uncultured crenarchaeote 29d5, Crenarchaeota, Archaea

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comp(2336..2818)
DNA (483bp) protein (161aa)
Putative uncharacterized protein Tax=uncultured crenarchaeote 29d5 RepID=D4N6Z1_9CREN
Putative uncharacterized protein {ECO:0000313|EMBL:ACY24477.1}; species="Archaea; Crenarchaeota; environmental samples.;" source="uncultured crenarchaeote 29d5.;"
PLM3-1_50_b1_sep16_scaffold_1093_4
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(2957..3943)
DNA (987bp) protein (329aa)
Zn-dependent alcohol dehydrogenase Tax=Synechocystis sp. PCC 7509 RepID=L8KTK6_9SYNC
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:BAC90777.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3-1_50_b1_sep16_scaffold_1093_5
unknown

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4058..4252
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_6
unknown

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comp(4638..4772)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_7
unknown

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4907..5524
DNA (618bp) protein (206aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_8
unknown

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6005..6226
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_9
unknown

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comp(6352..6477)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_10
unknown

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comp(6578..6745)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6893..8263)
DNA (1371bp) protein (457aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFG5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57573.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8379..9530)
DNA (1152bp) protein (384aa)
Putative glycosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH10_NITGG
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AIF82221.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1093_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9881..10294)
DNA (414bp) protein (138aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH99_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU58243.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_14
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10621..11247
DNA (627bp) protein (209aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84355.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1093_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(11794..12024)
DNA (231bp) protein (77aa)
Putative stress response protein YsnF Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHC9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83734.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1093_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12334..13278
DNA (945bp) protein (315aa)
Putative CorA ion transporter Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILG9_NITGG
CorA ion transporter
Putative CorA ion transporter {ECO:0000313|EMBL:AFU59482.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_17
unknown

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13241..13462
DNA (222bp) protein (74aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13463..15145
DNA (1683bp) protein (561aa)
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMG1_NITGG
signal transduction histidine kinase, with phosphoacceptor and ATP binding domain
Putative signal transduction histidine kinase, with phosphoacceptor and ATP binding domain {ECO:0000313|EMBL:AFU60247.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15192..15590)
DNA (399bp) protein (133aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML6_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU57999.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15966..16481
DNA (516bp) protein (172aa)
nuoB1; NADH-quinone oxidoreductase subunit B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B {ECO:0000313|EMBL:AFU58093.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58093.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGW9_NITGG
PLM3-1_50_b1_sep16_scaffold_1093_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16756..17763
DNA (1008bp) protein (336aa)
Putative aldo/keto reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM82_NITGG
aldo/keto reductase
Putative aldo/keto reductase {ECO:0000313|EMBL:AFU60087.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17806..19062)
DNA (1257bp) protein (419aa)
ABC efflux transporter, FtsX-domain permease protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILC9_NITGG
ABC efflux transporter, FtsX-domain permease
ABC efflux transporter, FtsX-domain permease protein {ECO:0000313|EMBL:AFU59432.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19078..21624)
DNA (2547bp) protein (849aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDF4_NITGG
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC16977.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1093_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(21621..22343)
DNA (723bp) protein (241aa)
ABC efflux transporter, ATP-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHK5_NITGG
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:AIF83005.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1093_25
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22677..23618
DNA (942bp) protein (314aa)
Putative transcriptional regulator, AsnC family Tax=Thaumarchaeota archaeon N4 RepID=V6AVV7_9ARCH
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIF85564.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1093_26
unknown

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comp(23652..23921)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24758..25192
DNA (435bp) protein (145aa)
Putative signal transduction response regulator, receiver domain protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW8_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU58349.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1093_28
unknown

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comp(25356..25742)
DNA (387bp) protein (129aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1093_29
unknown

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comp(25889..26077)
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying 29 items

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