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PLM3-1_50_b1_sep16_scaffold_1156

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1156_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3..251
DNA (249bp) protein (83aa)
Putative methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IML1_NITGG
methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AFU60382.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_2
Thermoproteus sp. AZ2, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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comp(260..484)
DNA (225bp) protein (75aa)
Transcriptional regulator Tax=Thermofilum sp. 1910b RepID=S5ZF66_9CREN
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:KJR73121.1}; species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteus sp. AZ2.;"
PLM3-1_50_b1_sep16_scaffold_1156_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(481..978)
DNA (498bp) protein (166aa)
Putative ribosomal-protein-alanine acetyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG47_NITGG
ribosomal-protein-alanine acetyltransferase
Putative ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:AFU60381.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1037..2152)
DNA (1116bp) protein (372aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP24_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60379.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_5
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2197..2760)
DNA (564bp) protein (188aa)
TATA-box-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMK9_NITGG
tbp; TATA-box-binding protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408, ECO:0000256|RuleBase:RU000523}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {ECO:0000256|HAMAP-Rule:MF_00408}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1156_6
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2871..3224)
DNA (354bp) protein (118aa)
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AIC14526.1}; EC=3.1.1.29 {ECO:0000313|EMBL:AIC14526.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Peptidyl-tRNA hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBX6_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3273..4460
DNA (1188bp) protein (396aa)
Geranylgeranyl reductase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKB9_NITGG
Geranylgeranyl reductase family protein
Geranylgeranyl reductase family protein {ECO:0000313|EMBL:AFU58807.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4740..5021
DNA (282bp) protein (94aa)
Elongation factor 1-beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN60_NITGG
ef1b; translation elongation factor EF-1 beta
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5086..5970)
DNA (885bp) protein (295aa)
protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Protoheme IX farnesyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIG5_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6474..6734
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKN3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59057.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6853..7278)
DNA (426bp) protein (142aa)
Putative thioredoxin Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKS7_NITGG
putative thioredoxin (modular protein)
Putative thioredoxin (Modular protein) {ECO:0000313|EMBL:AIC16661.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1156_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7303..7683
DNA (381bp) protein (127aa)
Protein GrpE Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM33_NITGG
grpE; molecular chaperone GrpE
Protein GrpE {ECO:0000256|RuleBase:RU000639}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7736..7963
DNA (228bp) protein (76aa)
Protein GrpE (Fragment) Tax=Candidatus Nitrososphaera gargensis RepID=D9ZB92_9ARCH
grpE; molecular chaperone GrpE
Protein GrpE {ECO:0000256|RuleBase:RU000639}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;"
PLM3-1_50_b1_sep16_scaffold_1156_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7976..9844
DNA (1869bp) protein (623aa)
Chaperone protein DnaK Tax=Candidatus Nitrososphaera gargensis RepID=K0IF16_NITGG
dnaK; chaperone protein Dank
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9906..11021
DNA (1116bp) protein (372aa)
Chaperone protein DnaJ Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIY5_NITGG
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000313|EMBL:AIF85179.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1156_16
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11070..11654
DNA (585bp) protein (195aa)
Putative heat shock protein Hsp20 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INT8_NITGG
hsp20-4; heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AIC16665.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1156_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12228..12749
DNA (522bp) protein (174aa)
ABC efflux transporter, ATP-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMZ7_NITGG
ABC efflux transporter, ATP-binding protein
ABC efflux transporter, ATP-binding protein {ECO:0000313|EMBL:AFU58494.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12752..13960)
DNA (1209bp) protein (403aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMF3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16068.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1156_19
unknown

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14155..14697
DNA (543bp) protein (181aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1156_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14871..16793)
DNA (1923bp) protein (641aa)
glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Glutamyl-tRNA(Gln) amidotransferase subunit E Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA3_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_21
unknown

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comp(16868..17002)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1156_22
uncultured marine crenarchaeote HF4000_APKG3B16, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17104..17679)
DNA (576bp) protein (192aa)
Putative uncharacterized protein Tax=uncultured marine crenarchaeote HF4000_APKG3B16 RepID=B3T774_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08433.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000_APKG3B16.;"
PF03745 domain protein
PLM3-1_50_b1_sep16_scaffold_1156_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(17831..18658)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58483.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18886..19800)
DNA (915bp) protein (305aa)
succinyl-CoA synthetase (ADP-forming) alpha subunit (EC:6.2.1.5)
Succinyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:AIF84090.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AIF84090.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Succinate--CoA ligase (ADP-forming) alpha subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX0_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19803..19949)
DNA (147bp) protein (49aa)
sucC; succinate--CoA ligase subunit beta (EC:6.2.1.5)
Succinate--CoA ligase (ADP-forming) beta subunit {ECO:0000313|EMBL:AFU58480.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AFU58480.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Succinate--CoA ligase (ADP-forming) beta subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA1_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(19976..20821)
DNA (846bp) protein (282aa)
sucC; succinate--CoA ligase subunit beta (EC:6.2.1.5)
Succinate--CoA ligase (ADP-forming) beta subunit {ECO:0000313|EMBL:AFU58480.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AFU58480.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Succinate--CoA ligase (ADP-forming) beta subunit Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA1_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_27
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

20915..21082
DNA (168bp) protein (56aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14771.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1156_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21200..22843
DNA (1644bp) protein (548aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II53_NITGG
hypothetical protein with ATP-binding domain
Uncharacterized protein {ECO:0000313|EMBL:AFU58623.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1156_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22914..23510
DNA (597bp) protein (199aa)
psmB2; proteasome subunit beta (EC:3.4.25.1)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {ECO:0000256|HAMAP-Rule:MF_02113}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Proteasome subunit beta Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN23_NITGG
PLM3-1_50_b1_sep16_scaffold_1156_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(23548..24030)
DNA (483bp) protein (161aa)
Putative PUA domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFN5_NITGG
PUA domain-containing protein
Putative PUA domain-containing protein {ECO:0000313|EMBL:AFU58625.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Displaying items 1-30 of 100 in total

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