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PLM3-1_50_b1_sep16_scaffold_1548

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1548_1
unknown

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3..617
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1548_2
unknown

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comp(982..1308)
DNA (327bp) protein (109aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1548_3
unknown

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comp(1644..1811)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1548_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2188..3417
DNA (1230bp) protein (410aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILJ9_NITGG
quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AFU60468.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1548_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3847..4074
DNA (228bp) protein (76aa)
adh4; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AFU59601.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFU59601.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NAD-dependent alcohol dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE04_NITGG
PLM3-1_50_b1_sep16_scaffold_1548_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4149..4766
DNA (618bp) protein (206aa)
adh4; NAD-dependent alcohol dehydrogenase (EC:1.1.1.1)
NAD-dependent alcohol dehydrogenase {ECO:0000313|EMBL:AFU59601.1}; EC=1.1.1.1 {ECO:0000313|EMBL:AFU59601.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NAD-dependent alcohol dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE04_NITGG
PLM3-1_50_b1_sep16_scaffold_1548_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5132..6919
DNA (1788bp) protein (596aa)
F5/8 type C domain-containing protein Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CB18_MYXFH
F5/8 type C domain-containing protein
F5/8 type C domain-containing protein {ECO:0000313|EMBL:AEI68399.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM3-1_50_b1_sep16_scaffold_1548_8
unknown

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comp(7052..7189)
DNA (138bp) protein (46aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1548_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7283..8491
DNA (1209bp) protein (403aa)
gltA; citrate synthase (EC:2.3.3.1)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Citrate synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICJ4_NITGG
PLM3-1_50_b1_sep16_scaffold_1548_trna_1
unknown

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8593..8679
DNA (87bp)
transferRNA Cys
PLM3-1_50_b1_sep16_scaffold_1548_10

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8964..9269
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=uncultured archaeon RepID=I3RKD1_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:AFK24791.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1548_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9717..10328
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKA1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58752.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1548_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10725..12191)
DNA (1467bp) protein (489aa)
Putative FAD linked oxidase-like protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN52_NITGG
FAD linked oxidase-like protein
Putative FAD linked oxidase-like protein {ECO:0000313|EMBL:AFU58769.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1548_13
unknown

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comp(12259..12453)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1548_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12490..13386)
DNA (897bp) protein (299aa)
map; methionyl aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01975}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Methionine aminopeptidase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INA9_NITGG
PLM3-1_50_b1_sep16_scaffold_1548_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(13847..14227)
DNA (381bp) protein (127aa)
nitrous oxide reductase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM3-1_50_b1_sep16_scaffold_1548_16
unknown

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14506..14733
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 17 items

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