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PLM3-1_50_b1_sep16_scaffold_1843

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1843_1
unknown

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2..283
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1843_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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307..1497
DNA (1191bp) protein (397aa)
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.213)
N(2),N(2)-dimethylguanosine tRNA methyltransferase {ECO:0000313|EMBL:AFU60370.1}; EC=2.1.1.213 {ECO:0000313|EMBL:AFU60370.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
N(2),N(2)-dimethylguanosine tRNA methyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJU5_NITGG
PLM3-1_50_b1_sep16_scaffold_1843_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1586..2371
DNA (786bp) protein (262aa)
ABC uptake transporter, ATP-binding protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICS5_NITGG
ABC uptake transporter, ATP-binding protein
ABC uptake transporter, ATP-binding protein {ECO:0000313|EMBL:AFU57450.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2368..3138)
DNA (771bp) protein (257aa)
Putative 5 10-methylenetetrahydrofolate reductase-like protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I853_NITGG
5 10-methylenetetrahydrofolate reductase-like protein
Putative 5 10-methylenetetrahydrofolate reductase-like protein {ECO:0000313|EMBL:AFU57451.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3245..3853
DNA (609bp) protein (203aa)
Putative NUDIX hydrolase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHU4_NITGG
NUDIX hydrolase
Putative NUDIX hydrolase {ECO:0000313|EMBL:AFU57452.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4253..5707
DNA (1455bp) protein (485aa)
ubiD; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
Putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000313|EMBL:AFU59626.1}; EC=4.1.1.- {ECO:0000313|EMBL:AFU59626.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE42_NITGG
PLM3-1_50_b1_sep16_scaffold_1843_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5748..6575
DNA (828bp) protein (276aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBK0_NITGG
PLM3-1_50_b1_sep16_scaffold_1843_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6618..7034)
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II76_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58658.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_9
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7128..7868
DNA (741bp) protein (247aa)
proteasome endopeptidase complex, archaeal, alpha subunit (EC:3.4.25.1)
Proteasome endopeptidase complex, archaeal, alpha subunit {ECO:0000313|EMBL:AIF83899.1}; EC=3.4.25.1 {ECO:0000313|EMBL:AIF83899.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Proteasome subunit alpha Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN30_NITGG
PLM3-1_50_b1_sep16_scaffold_1843_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7927..8598
DNA (672bp) protein (224aa)
Alkyl hydroperoxide reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFR8_NITGG
AhpC/TSA family protein
AhpC/TSA family protein {ECO:0000313|EMBL:AIF83898.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1843_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8615..9439
DNA (825bp) protein (275aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBK8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58661.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_12
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9584..10006
DNA (423bp) protein (141aa)
50S ribosomal protein L3p Tax=Candidatus Nitrososphaera gargensis RepID=K0II78_NITGG
rpl3p; 50S ribosomal protein L3p
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10174..10452
DNA (279bp) protein (93aa)
50S ribosomal protein L3p Tax=Candidatus Nitrososphaera gargensis RepID=K0II78_NITGG
Suspect SCG annotation. See neighboring gene [PLM3-1_50_b1_sep16_scaffold_1843_12].
rpl3p; 50S ribosomal protein L3p
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10640..11194
DNA (555bp) protein (185aa)
50S ribosomal protein L4p Tax=Candidatus Nitrososphaera gargensis RepID=K0IN31_NITGG
rpl4p; 50S ribosomal protein L4p
50S ribosomal protein L4p {ECO:0000313|EMBL:AFU58664.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_15
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11161..11469
DNA (309bp) protein (103aa)
50S ribosomal protein L23P Tax=Candidatus Nitrososphaera gargensis RepID=K0IFS3_NITGG
LSU ribosomal protein L23P
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1843_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11649..11930
DNA (282bp) protein (94aa)
30S ribosomal protein S19P Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBL6_NITGG
SSU ribosomal protein S19P
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1843_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11927..12409
DNA (483bp) protein (161aa)
50S ribosomal protein L22P Tax=Candidatus Nitrososphaera gargensis RepID=K0IK63_NITGG
rpl22p; 50S ribosomal protein L22p
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_18
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12448..13155
DNA (708bp) protein (236aa)
30S ribosomal protein S3 Tax=Candidatus Nitrososphaera gargensis RepID=K0II96_NITGG
rps3p; 30S ribosomal protein S3p
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13155..13361
DNA (207bp) protein (69aa)
50S ribosomal protein L29P Tax=Candidatus Nitrososphaera gargensis RepID=K0IN32_NITGG
rpl29p; 50S ribosomal protein L29p
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_20
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13358..13621
DNA (264bp) protein (88aa)
RNase P/RNase MRP subunit p29 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|HAMAP-Rule:MF_00754}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1843_21
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13635..13967
DNA (333bp) protein (111aa)
30S ribosomal protein S17P Tax=Candidatus Nitrososphaera gargensis RepID=K0IBP2_NITGG
rps17p; 30S ribosomal protein S17p
30S ribosomal protein S17p {ECO:0000313|EMBL:AIC14700.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


13957..14391
DNA (435bp) protein (145aa)
50S ribosomal protein L14 Tax=Candidatus Nitrososphaera gargensis RepID=K0IK69_NITGG
rpl14p; 50S ribosomal protein L14p
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_23
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


14401..14817
DNA (417bp) protein (139aa)
50S ribosomal protein L24P Tax=Candidatus Nitrososphaera gargensis RepID=K0IIA4_NITGG
rpl24p; 30S ribosomal protein L24p
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_24
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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14820..15539
DNA (720bp) protein (240aa)
30S ribosomal protein S4e Tax=Candidatus Nitrososphaera gargensis RepID=K0IN33_NITGG
ribosomal protein S4E
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_25
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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15541..16050
DNA (510bp) protein (170aa)
50S ribosomal protein L5 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFV4_NITGG
LSU ribosomal protein L5P
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1843_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16050..16229
DNA (180bp) protein (60aa)
30S ribosomal protein S14 type Z Tax=Candidatus Nitrososphaera gargensis RepID=K0IBQ0_NITGG
rps14p; 30S ribosomal protein S14p
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_27
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


16238..16639
DNA (402bp) protein (134aa)
30S ribosomal protein S8 Tax=Candidatus Nitrososphaera gargensis RepID=K0IK73_NITGG
rps8p; 30S ribosomal protein S8p
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_1843_28
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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16629..17165
DNA (537bp) protein (179aa)
50S ribosomal protein L6 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIA7_NITGG
archaeal ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_1843_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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17236..17928
DNA (693bp) protein (231aa)
Putative nucleotidyl transferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN35_NITGG
nucleotidyl transferase
Putative nucleotidyl transferase {ECO:0000313|EMBL:AFU58684.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_1843_30
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

17925..18923
DNA (999bp) protein (333aa)
mer; luciferase-like monooxygenase family protein (EC:1.5.99.11)
Luciferase-like monooxygenase family protein {ECO:0000313|EMBL:AFU58683.1}; EC=1.5.99.11 {ECO:0000313|EMBL:AFU58683.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Luciferase-like monooxygenase family protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIA9_NITGG
Displaying items 1-30 of 34 in total

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