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PLM3-1_50_b1_sep16_scaffold_2027

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_2027_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(3..422)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKE0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59698.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2027_2
unknown

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691..858
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2027_3
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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961..1569
DNA (609bp) protein (203aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI00037C3412
hypothetical protein
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:AIY18095.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM3-1_50_b1_sep16_scaffold_2027_4

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comp(1724..2197)
DNA (474bp) protein (158aa)
pyridoxamine 5'-phosphate oxidase bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:AIF11742.1}; species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_53_E03.;"
putative flavin-nucleotide-binding protein
PLM3-1_50_b1_sep16_scaffold_2027_5
unknown

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comp(2335..2568)
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2027_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2915..4543)
DNA (1629bp) protein (543aa)
ABC-1 domain-containing protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II14_NITGG
ABC-1 domain-containing protein
ABC-1 domain-containing protein {ECO:0000313|EMBL:AFU59565.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2027_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4641..4925)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDV7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59566.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2027_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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5081..5521
DNA (441bp) protein (147aa)
DNA protection protein DPS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMI4_NITGG
dps3; ferritin, Dps family protein
Ferritin, Dps family protein {ECO:0000313|EMBL:AIC16275.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_2027_9
unknown

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5787..5945
DNA (159bp) protein (53aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_2027_10
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5902..7200)
DNA (1299bp) protein (433aa)
Putative quinoprotein glucose/ sorbosone dehydrogenase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJY2_NITGG
putative quinoprotein glucose/sorbosone dehydrogenase
Putative quinoprotein glucose/ sorbosone dehydrogenase {ECO:0000313|EMBL:AIC14760.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_2027_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7794..8477
DNA (684bp) protein (228aa)
Putative phosphoribosyl transferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMW6_NITGG
phosphoribosyl transferase
Putative phosphoribosyl transferase {ECO:0000313|EMBL:AFU58339.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_2027_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8524..10032)
DNA (1509bp) protein (503aa)
nuoN; NADH-quinone oxidoreductase subunit N (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit N {ECO:0000313|EMBL:AFU58102.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58102.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit N Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIZ0_NITGG
PLM3-1_50_b1_sep16_scaffold_2027_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10046..12115)
DNA (2070bp) protein (690aa)
nuoL; NADH-quinone oxidoreductase subunit L (EC:1.6.99.5)
NADH dehydrogenase subunit L {ECO:0000313|EMBL:AIF84597.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF84597.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
NADH-quinone oxidoreductase subunit L Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I9U5_NITGG
PLM3-1_50_b1_sep16_scaffold_2027_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12228..13943)
DNA (1716bp) protein (572aa)
nuoM; NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:AFU58100.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58100.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit M Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IE98_NITGG
PLM3-1_50_b1_sep16_scaffold_2027_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13967..14269)
DNA (303bp) protein (101aa)
nuoK; NADH-quinone oxidoreductase subunit K (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit K {ECO:0000313|EMBL:AFU58099.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AFU58099.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
NADH-quinone oxidoreductase subunit K Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMQ4_NITGG
PLM3-1_50_b1_sep16_scaffold_2027_16
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14253..14777)
DNA (525bp) protein (175aa)
NADH dehydrogenase subunit J (EC:1.6.5.3)
NADH dehydrogenase subunit J {ECO:0000313|EMBL:AIF84600.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AIF84600.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
NADH-quinone oxidoreductase subunit J Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGX3_NITGG
PLM3-1_50_b1_sep16_scaffold_2027_17
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(14770..14937)
DNA (168bp) protein (56aa)
nuoI; NADH-quinone oxidoreductase subunit I (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit I {ECO:0000313|EMBL:AIC15394.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AIC15394.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
NADH-quinone oxidoreductase subunit I Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIY7_NITGG
Displaying 17 items

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