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PLM3-1_50_b1_sep16_scaffold_350

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_350_1
unknown

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comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_350_2
unknown

Not on your lists

466..1209
DNA (744bp) protein (248aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_350_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1242..2792)
DNA (1551bp) protein (517aa)
Putative 2-alkenal reductase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH63_NITGG
2-alkenal reductase
Putative 2-alkenal reductase {ECO:0000313|EMBL:AFU58173.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_350_4
unknown

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3060..3251
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_350_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3911..5512
DNA (1602bp) protein (534aa)
pckA; ATP-dependent phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoenolpyruvate carboxykinase [ATP] Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJI5_NITGG
PLM3-1_50_b1_sep16_scaffold_350_6
unknown

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6049..6573
DNA (525bp) protein (175aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_350_7
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7432..8004)
DNA (573bp) protein (191aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL00_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC16076.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_350_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8114..8437
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INL5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59584.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_350_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8529..8921
DNA (393bp) protein (131aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDV4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56998.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_350_10
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(8967..9326)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHD2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF83375.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_350_11
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9392..10108
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ING6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC17300.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_350_12
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10204..10824
DNA (621bp) protein (207aa)
50S ribosomal protein L32e Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
LSU ribosomal protein L32E
50S ribosomal protein L32e {ECO:0000256|HAMAP-Rule:MF_00810}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_350_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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10824..11270
DNA (447bp) protein (149aa)
50S ribosomal protein L19e Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_350_14
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11273..11620)
DNA (348bp) protein (116aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
Methylated-DNA--protein-cysteine methyltransferase Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KMG3_9ARCH
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:EGG41421.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum limnia SFB1.;"
PLM3-1_50_b1_sep16_scaffold_350_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11671..12498)
DNA (828bp) protein (276aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative D-tyrosyl-tRNA(Tyr) deacylase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG
PLM3-1_50_b1_sep16_scaffold_350_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12554..15529)
DNA (2976bp) protein (992aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INH1_NITGG
PLM3-1_50_b1_sep16_scaffold_350_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(15522..18275)
DNA (2754bp) protein (918aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF9_NITGG
PLM3-1_50_b1_sep16_scaffold_350_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18603..19919
DNA (1317bp) protein (439aa)
aspS1; aspartate--tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase {ECO:0000313|EMBL:AFU57221.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AFU57221.1};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Aspartate--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7K0_NITGG
PLM3-1_50_b1_sep16_scaffold_350_19
unknown

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19953..20225
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_350_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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20227..21672
DNA (1446bp) protein (482aa)
gatA; glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Glutamyl-tRNA(Gln) amidotransferase subunit A Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ1_NITGG
PLM3-1_50_b1_sep16_scaffold_350_21
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21669..23111
DNA (1443bp) protein (481aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEL7_NITGG
PLM3-1_50_b1_sep16_scaffold_350_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(23179..24333)
DNA (1155bp) protein (385aa)
LOR/SDH bifunctional protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7J4_NITGG
LOR/SDH bifunctional protein
LOR/SDH bifunctional protein {ECO:0000313|EMBL:AFU57211.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_350_23
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24446..24772)
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84848.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera evergladensis SR1.;"
PLM3-1_50_b1_sep16_scaffold_350_24
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(25429..26001)
DNA (573bp) protein (191aa)
Metal dependent phosphohydrolase Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A1C0_NITMS
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABX12755.1}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SCM1).;"
PLM3-1_50_b1_sep16_scaffold_350_25
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(26269..26823)
DNA (555bp) protein (185aa)
Putative ATP--cobalamin adenosyltransferase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7I6_NITGG
putative ATP--cobalamin adenosyltransferase
Putative ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:AIC15638.1}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
PLM3-1_50_b1_sep16_scaffold_350_26
unknown

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comp(26960..27121)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 26 items

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