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PLM3-1_50_b1_sep16_scaffold_14807

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_14807_1
unknown

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comp(3..149)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_14807_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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428..697
DNA (270bp) protein (90aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Putative phosphoribosylformylglycinamidine synthase PurS Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFC8_NITGG
purS; phosphoribosylformylglycinamidine synthase PurS
PLM3-1_50_b1_sep16_scaffold_14807_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(742..2652)
DNA (1911bp) protein (637aa)
argS; arginine--tRNA ligase (EC:6.1.1.19)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Arginine--tRNA ligase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM12_NITGG
PLM3-1_50_b1_sep16_scaffold_14807_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2656..3189)
DNA (534bp) protein (178aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01419};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
Phosphoglycolate phosphatase Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF98_NITGG
PLM3-1_50_b1_sep16_scaffold_14807_trna_1
unknown

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3422..3511
DNA (90bp)
transferRNA Glu
PLM3-1_50_b1_sep16_scaffold_14807_5

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3584..3955
DNA (372bp) protein (124aa)
30S ribosomal protein S24e Tax=uncultured archaeon RepID=I3RKL5_9ARCH
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps24e; 30S ribosomal protein S24e
PLM3-1_50_b1_sep16_scaffold_14807_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3964..4149
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae Tax=Candidatus Nitrososphaera gargensis RepID=K0INM2_NITGG
rps27ae; 30S ribosomal protein S27ae
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera gargensis (strain Ga9.2).;"
PLM3-1_50_b1_sep16_scaffold_14807_7
unknown

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comp(4222..4779)
DNA (558bp) protein (186aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_14807_8
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5125..6483)
DNA (1359bp) protein (453aa)
Signal recognition particle 54 kDa protein Tax=uncultured archaeon RepID=I3RKL0_9ARCH
srp54; signal recognition particle SRP54 subunit protein
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera viennensis EN76.;"
Displaying 9 items

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