ggKbase home page

PLM3-1_50_b1_sep16_scaffold_552_14

Organism: PLM6_50_b1_sep16_Thaumarchaeota_Marine_Group_I_36_8

near complete RP 33 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 37 / 38 MC: 1
Location: 15662..16165

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4p Tax=Candidatus Nitrososphaera gargensis RepID=K0IJ31_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 154.0
  • Bit_score: 211
  • Evalue 4.60e-52
30S ribosomal protein S4 {ECO:0000256|SAAS:SAAS00016650}; Flags: Fragment;; species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitrososphaera gargensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 170.0
  • Bit_score: 236
  • Evalue 1.40e-59
rps4p; 30S ribosomal protein S4p similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 168.0
  • Bit_score: 225
  • Evalue 8.80e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Nitrososphaera gargensis → Nitrososphaera → Nitrososphaerales → Nitrososphaeria → Thaumarchaeota → Archaea

Sequences

DNA sequence
Length: 504
ATGGGAGATCCAAGAAAACCACGTAAAAGTTACAGAAGACCAAGGCGAATATGGAATTCGGACCAGCTAAGTTCAGAGCTGTATATCATAGGTTCTTACGGTCTCAGGAACAAGAGAGAATTGTGGAAGGCTCAAACCAGGGTTGCAAATTTTAGAAATCAAGCAAGGACGCTGCTGGCTTTGACGTTGGAAGACAGACAGGAAAAAGAGACGCATCTATTGTCTTTCCTAAATAGGCTGGGACTTACAAGTACTTCGAGCTTAGACGACATTTTGAATTTGAAAATTGAAGACATACTAGAAAGAAGGTTGCAGACAATTGTAATGAGGAAAATGGGTATCAAATCTCCATTTCAGGCAAGGCAAGTGGTTATCCATGGACATGTTTCCATCGGGAATAGAAAGGTGAACTTGCCTGGATATCTTGTAAAGAAAGAAGATGAACCAAAAATTTTGGTGCATGTACAGATTACAAATAAACCAGCAGAGCCCGTAACAAGTTAA
PROTEIN sequence
Length: 168
MGDPRKPRKSYRRPRRIWNSDQLSSELYIIGSYGLRNKRELWKAQTRVANFRNQARTLLALTLEDRQEKETHLLSFLNRLGLTSTSSLDDILNLKIEDILERRLQTIVMRKMGIKSPFQARQVVIHGHVSIGNRKVNLPGYLVKKEDEPKILVHVQITNKPAEPVTS*