ggKbase home page

PLM3-1_50_b1_sep16_scaffold_5811

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_5811_1
unknown

Not on your lists

3..128
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_5811_2
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(189..827)
DNA (639bp) protein (213aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00035E01F6
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU36172.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM3-1_50_b1_sep16_scaffold_5811_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(836..2020)
DNA (1185bp) protein (395aa)
hypothetical protein Tax=Nocardiopsis baichengensis RepID=UPI0003467991
Histidine kinase {ECO:0000313|EMBL:EYR63436.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
two component system sensor kinase
PLM3-1_50_b1_sep16_scaffold_5811_4
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2129..2929
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Tetrasphaera elongata Lp2 RepID=N0DY65_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CCH69233.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_5811_5
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2975..3991)
DNA (1017bp) protein (339aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000313|EMBL:AEG44480.1}; EC=2.2.1.7 {ECO:0000313|EMBL:AEG44480.1};; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
1-deoxy-D-xylulose-5-phosphate synthase Tax=Isoptericola variabilis (strain 225) RepID=F6FW10_ISOV2
PLM3-1_50_b1_sep16_scaffold_5811_6
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3988..4893)
DNA (906bp) protein (302aa)
transketolase (EC:2.2.1.1)
Transketolase Tax=Isoptericola variabilis (strain 225) RepID=F6FW09_ISOV2
Transketolase {ECO:0000313|EMBL:KEP24734.1}; species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
PLM3-1_50_b1_sep16_scaffold_5811_7
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4890..5429)
DNA (540bp) protein (180aa)
Xylose isomerase {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511}; EC=5.3.1.5 {ECO:0000256|RuleBase:RU000609, ECO:0000256|SAAS:SAAS00108511};; species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
Xylose isomerase domain-containing protein TIM barrel Tax=Isoptericola variabilis (strain 225) RepID=F6FW08_ISOV2
xylose isomerase domain-containing protein TIM barrel
Displaying 7 items

View Taxonomy