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PLM3-1_50_b1_sep16_scaffold_7705

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_7705_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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251..2164
DNA (1914bp) protein (638aa)
Multi-sensor signal transduction histidine kinase Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U6I1_DEIML
multi-sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3-1_50_b1_sep16_scaffold_7705_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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2248..3612
DNA (1365bp) protein (455aa)
Multi-sensor signal transduction histidine kinase Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SGP0_GEOOG
multi-sensor signal transduction histidine kinase
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADB72922.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM3-1_50_b1_sep16_scaffold_7705_3
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

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3802..4143
DNA (342bp) protein (114aa)
plasmid stabilization protein Tax=Catelliglobosispora koreensis RepID=UPI00036BD56B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU73039.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM3-1_50_b1_sep16_scaffold_7705_4
unknown

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4140..4262
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_7705_5
unknown

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4259..4600
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_7705_6
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4672..5430
DNA (759bp) protein (253aa)
RNA polymerase sigma factor Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SHE3_NOCSJ
sigma-70 region 2 domain-containing protein
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM3-1_50_b1_sep16_scaffold_7705_7
Bacillus sp. WP8, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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5423..5851
DNA (429bp) protein (143aa)
serine/threonine protein kinase (EC:2.7.11.1)
Serine-protein kinase RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; EC=2.7.11.1 {ECO:0000256|HAMAP-Rule:MF_00638, ECO:0000313|EMBL:AIZ59232.1};; Anti-sigma-B factor {ECO:0000256|HAMAP-Rule:MF_00638}; Sigma-B negative effector RsbW {ECO:0000256|HAMAP-Rule:MF_00638}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. WP8.;"
serine-protein kinase Tax=Bacillus pumilus RepID=UPI0003070A80
PLM3-1_50_b1_sep16_scaffold_7705_8
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5857..6621)
DNA (765bp) protein (255aa)
Anti-sigma factor antagonist Tax=Dermacoccus sp. Ellin185 RepID=E3B7I7_9MICO
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_7705_9
unknown

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comp(6716..7066)
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_7705_10
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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7202..7594
DNA (393bp) protein (131aa)
Anti-sigma factor antagonist Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7B8Y9_NOCDD
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM3-1_50_b1_sep16_scaffold_7705_11
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7647..7946)
DNA (300bp) protein (100aa)
Anti-sigma factor antagonist Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N585_KITSK
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
rsbV; Anti-sigma F factor antagonist
PLM3-1_50_b1_sep16_scaffold_7705_12
unknown

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8027..8410
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_7705_13
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(8449..8880)
DNA (432bp) protein (144aa)
Putative signal transduction protein with CBS domains Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U2J2_ETHHY
oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3-1_50_b1_sep16_scaffold_7705_14
unknown

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9011..9322
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_7705_15
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9389..10204
DNA (816bp) protein (272aa)
Uncharacterized protein Tax=Mycobacterium xenopi RIVM700367 RepID=I0RX74_MYCXE
Uncharacterized protein {ECO:0000313|EMBL:EID15727.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
TetR family transcriptional regulator
PLM3-1_50_b1_sep16_scaffold_7705_16
unknown

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comp(10773..10898)
DNA (126bp) protein (42aa)

This feature has no annotations

Displaying 16 items

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