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PLM3-1_50_b1_sep16_scaffold_5965

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_5965_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(2..793)
DNA (792bp) protein (264aa)
Putative signaling protein Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S5F4_ACTS5
putative signaling protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_5965_2
unknown

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798..1415
DNA (618bp) protein (206aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_5965_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1900..3042
DNA (1143bp) protein (381aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6N8_CONWI
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_5965_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(3492..3743)
DNA (252bp) protein (84aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_5965_5
R_WOR_2_63_39, WOR-2, Bacteria

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comp(4209..4421)
DNA (213bp) protein (71aa)
Cold-shock DNA-binding domain protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3K0_CONWI
cold-shock protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
PLM3-1_50_b1_sep16_scaffold_5965_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4590..6428
DNA (1839bp) protein (613aa)
GTP-binding protein TypA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F460_CONWI
GTP-binding protein TypA
GTP-binding protein TypA {ECO:0000313|EMBL:ADB50432.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_5965_7
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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6754..7443
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EJW3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84975.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
PLM3-1_50_b1_sep16_scaffold_5965_8
unknown

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7800..8348
DNA (549bp) protein (183aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_5965_9
unknown

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8594..8737
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_5965_trna_3
unknown

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comp(9016..9108)
DNA (93bp)
transferRNA Lys
PLM3-1_50_b1_sep16_scaffold_5965_10
Streptomyces sp. NRRL F-4428, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9321..9695
DNA (375bp) protein (125aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF57_ANADF
Glyoxalase {ECO:0000313|EMBL:KJK53916.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL F-4428.;"
glyoxalase/bleomycin resistance protein/dioxygenase
PLM3-1_50_b1_sep16_scaffold_5965_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

9710..10327
DNA (618bp) protein (206aa)
Hydrolase of the alpha/beta-hydrolase fold-like protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC05_CONWI
alpha/beta hydrolase
Hydrolase of the alpha/beta-hydrolase fold-like protein {ECO:0000313|EMBL:ADB51420.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_5965_12
RLO_RIF02_62_27, RIF2, Bacteria

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comp(10413..11333)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Patulibacter medicamentivorans RepID=H0E3A1_9ACTN
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3-1_50_b1_sep16_scaffold_5965_trna_1
unknown

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11419..11491
DNA (73bp)
transferRNA Glu
PLM3-1_50_b1_sep16_scaffold_5965_trna_2
unknown

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11571..11643
DNA (73bp)
transferRNA Val
PLM3-1_50_b1_sep16_scaffold_5965_13
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

11758..11868
DNA (111bp) protein (37aa)
peptidylprolyl isomerase (EC:5.2.1.8)
peptidylprolyl isomerase Tax=Patulibacter americanus RepID=UPI0003B7B625
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying 16 items

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