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PLM3-1_50_b1_sep16_scaffold_1068

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1068_1
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(113..385)
DNA (273bp) protein (91aa)
UPI0003CDFAD2 related cluster Tax=unknown RepID=UPI0003CDFAD2
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_50_b1_sep16_scaffold_1068_2
unknown

Not on your lists

611..781
DNA (171bp) protein (57aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1068_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1155..1454)
DNA (300bp) protein (100aa)
Putative uncharacterized protein Tax=uncultured bacterium W5-102b RepID=H9BWK7_9BACT
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1479..2390)
DNA (912bp) protein (304aa)
ATP-cone domain protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) PF3_MARHT">RepID=F2NPF3_MARHT
ATP-cone domain-containing protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_5
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2387..3559)
DNA (1173bp) protein (391aa)
Cyclic 2,3-diphosphoglycerate synthetase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8EXG7_STRRM
Cyclic 2,3-diphosphoglycerate synthetase {ECO:0000313|EMBL:ELQ84238.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
cyclic 2,3-diphosphoglycerate-synthetase
PLM3-1_50_b1_sep16_scaffold_1068_6
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3574..4380)
DNA (807bp) protein (269aa)
Metallophosphoesterase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AVF9_RUBXD
metallophosphoesterase
Tax=RBG_16_Actinobacteria_64_13_curated
PLM3-1_50_b1_sep16_scaffold_1068_7

Not on your lists

4428..4805
DNA (378bp) protein (126aa)
Hypoxanthine phosphoribosyltransferase Tax=uncultured bacterium W5-102b RepID=H9BWL1_9BACT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:AFD03183.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium W5-102b.;"
putative hypoxanthine phosphoribosyl transferase with additional GAF motif
PLM3-1_50_b1_sep16_scaffold_1068_8
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

4809..5381
DNA (573bp) protein (191aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase Tax=uncultured bacterium W5-102b RepID=H9BWL2_9BACT
Tax=RBG_13_Chloroflexi_52_14_curated
PLM3-1_50_b1_sep16_scaffold_1068_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5447..6634)
DNA (1188bp) protein (396aa)
peptidase M23 Tax=Patulibacter americanus RepID=UPI0003B5D550
Membrane protein related to metalloendopeptidase {ECO:0000313|EMBL:EHN08891.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidase M23
PLM3-1_50_b1_sep16_scaffold_1068_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(6639..6989)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9V4_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM02042.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM3-1_50_b1_sep16_scaffold_1068_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6986..8938)
DNA (1953bp) protein (651aa)
cycK; cytochrome c-type biogenesis protein cycK bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
cytochrome C-type biogenesis protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9122..9532)
DNA (411bp) protein (137aa)
cytochrome C biogenesis protein CcdA Tax=Patulibacter americanus RepID=UPI0003B78772
Cytochrome c-type biogenesis protein CcmE
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9578..9820)
DNA (243bp) protein (81aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9888..10301)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F0I2_CONWI
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10521..11366
DNA (846bp) protein (282aa)
nfo; putative endonuclease IV (EC:3.1.21.2)
Putative endonuclease IV Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0Q9_UNCMA
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11309..14269)
DNA (2961bp) protein (987aa)
cyaI2; adenylate/guanylate cyclase (EC:4.6.1.1) bin=bin8_Chloro species=Rhizobium grahamii genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
adenylate/guanylate cyclase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_17
unknown

Not on your lists

comp(14319..14663)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1068_18
unknown

Not on your lists

comp(14654..15499)
DNA (846bp) protein (282aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1068_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

15604..16950
DNA (1347bp) protein (449aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase Tax=Patulibacter medicamentivorans RepID=H0EAU6_9ACTN
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17123..17581
DNA (459bp) protein (153aa)
thioesterase superfamily protein
Uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Flavobacterium columnare genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

17590..17919
DNA (330bp) protein (110aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_22
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18325..19083)
DNA (759bp) protein (253aa)
Putative uncharacterized protein Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CIW5_DESK7
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_23
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19375..20724)
DNA (1350bp) protein (450aa)
Integral membrane sensor signal transduction histidine kinase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F017_CONWI
integral membrane sensor signal transduction histidine kinase
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1068_24
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20738..21418)
DNA (681bp) protein (227aa)
Two component transcriptional regulator, winged helix family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5Z1_CONWI
Response regulator mprA
Response regulator mprA {ECO:0000313|EMBL:AHH94870.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM3-1_50_b1_sep16_scaffold_1068_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

21543..22649
DNA (1107bp) protein (369aa)
Protease Do Tax=Patulibacter medicamentivorans RepID=H0E561_9ACTN
peptidase S1 and S6 chymotrypsin/Hap
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1068_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(22776..24980)
DNA (2205bp) protein (735aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ0_CONWI
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1068_27
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(25196..27076)
DNA (1881bp) protein (627aa)
Single-stranded-DNA-specific exonuclease RecJ Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDY9_CONWI
single-stranded-DNA-specific exonuclease RecJ
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1068_28
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27176..27352)
DNA (177bp) protein (59aa)
Tax=RBG_16_Actinobacteria_67_10_curated
PLM3-1_50_b1_sep16_scaffold_1068_29
unknown

Not on your lists

comp(27390..27641)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1068_30
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(27780..28070)
DNA (291bp) protein (97aa)
Tax=RBG_16_Actinobacteria_67_10_curated
Displaying items 1-30 of 47 in total

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