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PLM3-1_50_b1_sep16_scaffold_1073

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3-1_50_b1_sep16_scaffold_1073_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(338..1036)
DNA (699bp) protein (233aa)
Hypothetical conserved protein Tax=uncultured candidate division OP1 bacterium RepID=H5SKH2_9BACT
Vegetative cell wall protein gp1 {ECO:0000313|EMBL:EWM10258.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1073_2
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(997..2409)
DNA (1413bp) protein (471aa)
Conserved repeat domain protein Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SE35_INTC7
Conserved repeat domain protein {ECO:0000313|EMBL:ADU47648.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
hypothetical protein
PLM3-1_50_b1_sep16_scaffold_1073_3
unknown

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comp(2541..3146)
DNA (606bp) protein (202aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_4
unknown

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3286..3459
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_5
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

3919..4194
DNA (276bp) protein (92aa)
UPI0003CDFAD2 related cluster Tax=unknown RepID=UPI0003CDFAD2
hypothetical protein
Tax=RBG_16_Ignavibacteria_34_14_curated
PLM3-1_50_b1_sep16_scaffold_1073_6
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4191..5108)
DNA (918bp) protein (306aa)
pilus assembly pathway ATPase PilB; K12276 MSHA biogenesis protein MshE bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
pilus assembly pathway ATPase PilB
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
PLM3-1_50_b1_sep16_scaffold_1073_7
unknown

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comp(5314..5628)
DNA (315bp) protein (105aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_8
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5714..6121)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Nocardiopsis ganjiahuensis RepID=UPI00034DADBD
Integral membrane protein
Integral membrane protein {ECO:0000313|EMBL:CCH33158.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM3-1_50_b1_sep16_scaffold_1073_9
unknown

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comp(6520..6828)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_10
unknown

Not on your lists

comp(6831..7040)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_11
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7430..8575)
DNA (1146bp) protein (382aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003686EE7
WD-40-like beta propeller repeat-containing protein
Tax=RBG_13_Chloroflexi_56_8_curated
PLM3-1_50_b1_sep16_scaffold_1073_12
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8572..9222)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00036D42CA
Uncharacterized protein {ECO:0000313|EMBL:KHD77865.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
ECF family RNA polymerase sigma-24 subunit
PLM3-1_50_b1_sep16_scaffold_1073_13
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9524..9991)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN30747.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
PLM3-1_50_b1_sep16_scaffold_1073_14
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10279..10725)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Arthrobacter sp. 162MFSha1.1 RepID=UPI00036D1F4D
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
PLM3-1_50_b1_sep16_scaffold_1073_15
unknown

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11067..11540
DNA (474bp) protein (158aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_trna_2
unknown

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comp(11555..11628)
DNA (74bp)
transferRNA Gly
PLM3-1_50_b1_sep16_scaffold_1073_16
RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11741..12145)
DNA (405bp) protein (135aa)
Putative SAM-dependent methyltransferase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQ68_9FIRM bin=16ft_combo_ws3_JS1 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
fructose-2,6-bisphosphatase
Tax=RIFOXYA2_FULL_OD1_Magasanikbacteria_44_8_curated
PLM3-1_50_b1_sep16_scaffold_1073_17
S_OP1_64_32, KB1, Bacteria

Not on your lists

comp(12142..12459)
DNA (318bp) protein (106aa)
Putative GTP cyclohydrolase 1 type 2 Tax=Mycobacterium hassiacum DSM 44199 RepID=K5B887_9MYCO
hypothetical protein
Tax=S_OP1_64_32
PLM3-1_50_b1_sep16_scaffold_1073_18
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(12511..14007)
DNA (1497bp) protein (499aa)
Aldehyde Dehydrogenase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1X5_SPHTD
aldehyde Dehydrogenase
Aldehyde Dehydrogenase {ECO:0000313|EMBL:ACZ38242.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM3-1_50_b1_sep16_scaffold_1073_19
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

14079..17069
DNA (2991bp) protein (997aa)
cyaI2; adenylate/guanylate cyclase (EC:4.6.1.1) bin=bin8_Chloro species=Rhizobium grahamii genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
cyaI2; guanylate cyclase (EC:4.6.1.1)
Tax=CSP1_4_Chloroflexi
PLM3-1_50_b1_sep16_scaffold_1073_20
unknown

Not on your lists

comp(17164..17685)
DNA (522bp) protein (174aa)

This feature has no annotations

PLM3-1_50_b1_sep16_scaffold_1073_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(17705..18310)
DNA (606bp) protein (202aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM3-1_50_b1_sep16_scaffold_1073_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18428..20467)
DNA (2040bp) protein (680aa)
Translation elongation factor G Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B7_CONWI
translation elongation factor G
Translation elongation factor G {ECO:0000313|EMBL:ADB52080.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1073_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(20759..21541)
DNA (783bp) protein (261aa)
RNA polymerase sigma factor Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1B8_CONWI
RNA polymerase sigma 28 subunit FliA/WhiG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3-1_50_b1_sep16_scaffold_1073_trna_1
unknown

Not on your lists

22009..22081
DNA (73bp)
transferRNA Trp
PLM3-1_50_b1_sep16_scaffold_1073_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

22131..22565
DNA (435bp) protein (145aa)
Glutathione-dependent formaldehyde-activating GFA Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAE4_CONWI
glutathione-dependent formaldehyde-activating GFA
Glutathione-dependent formaldehyde-activating GFA {ECO:0000313|EMBL:ADB49213.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 26 items

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